RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LAMP5Q9UJQ1 280 aa8.44□□□□□ -1.06
TTC28-208ENST00000612946 PCDH7O60245 1069 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ALPPL2P10696 532 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ALG1LQ6GMV1 187 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 NDUFAF7Q7L592 441 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 TRAPPC12Q8WVT3 735 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 MARC2Q969Z3 335 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 TSPAN10Q9H1Z9 355 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 DNAJC27Q9NZQ0 273 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 FFAR2O15552 330 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CILPO75339 1184 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 RPS12P25398 132 aaKnown RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 S100A11P31949 105 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 GPR143P51810 404 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ZNF155Q12901 538 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 C19orf35Q6ZS72 473 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ZNF561Q8N587 486 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 BRIX1Q8TDN6 353 aaKnown RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 CHTF18Q8WVB6 975 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 RANBP9Q96S59 729 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 DUSP22Q9NRW4 184 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ABRACLQ9P1F3 81 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 MYO7AQ13402 2215 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 C2CD4BA6NLJ0 364 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 GCAP28676 217 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 TAS2R19P59542 299 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 MLLT11Q13015 90 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 ZMAT1Q5H9K5 638 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 OR10K1Q8NGX5 313 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 COL26A1Q96A83 441 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 PSMD10O75832 226 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 LCKP06239 509 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 EBLN1P0CF75 366 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 BPIP17213 487 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 RAB5AP20339 215 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CYP2B6P20813 491 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 IL10RBQ08334 325 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 COL19A1Q14993 1142 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 AMHR2Q16671 573 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 SCIMPQ6UWF3 145 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 SLC9B2Q86UD5 537 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 NKD1Q969G9 470 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 GLYATL1Q969I3 302 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 NT5C3BQ969T7 300 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 RGMAQ96B86 450 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 COLEC10Q9Y6Z7 277 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ARP10275 920 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CCR8P51685 355 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 POU4F3Q15319 338 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 PAN3Q58A45 887 aaKnown RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 MRPL10Q7Z7H8 261 aaKnown RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 TCTE3Q8IZS6 198 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 SLC35F5Q8WV83 523 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 SLC7A6Q92536 515 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 DIRAS3O95661 229 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 DBIP07108 87 aaKnown RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 MMP10P09238 476 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 STEAP4Q687X5 459 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 LDB1Q86U70 411 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 LIX1LQ8IVB5 337 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ZNF101Q8IZC7 436 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 POGLUT1Q8NBL1 392 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 NRG4Q8WWG1 115 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 SEC22CQ9BRL7 303 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 SPHK1Q9NYA1 384 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 FER1L4A9Z1Z3 1794 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 TNFRSF10BO14763 440 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ECI1P42126 302 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CDK5R2Q13319 367 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CCINQ13939 588 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 MAGEH1Q9H213 219 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 PIK3C2BO00750 1634 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 WASH3PC4AMC7 463 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ZNF254O75437 659 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 AMHP03971 560 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 RAF1P04049 648 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 SFTPBP07988 381 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 GABRA5P31644 462 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CRISP1P54107 249 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 HTD2P86397 168 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ATXN7L3Q14CW9 347 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 CDC42EP5Q6NZY7 148 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 WASH2PQ6VEQ5 465 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 VTCN1Q7Z7D3 282 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 B3GNT7Q8NFL0 401 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 OR6T1Q8NGN1 323 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 FNDC9Q8TBE3 224 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 PNPLA2Q96AD5 504 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 GAPDHSO14556 408 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 FGF19O95750 216 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 NUDT6P53370 316 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 ZNF691Q5VV52 312 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 CMASQ8NFW8 434 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 FAM46BQ96A09 425 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 DUS3LQ96G46 650 aaKnown RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 ZNF587Q96SQ5 575 aaPredicted RBP8.43□□□□□ -1.06
TTC28-208ENST00000612946 AMBNQ9NP70 447 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 RIMS3Q9UJD0 308 aa8.43□□□□□ -1.06
TTC28-208ENST00000612946 HIF3AQ9Y2N7 669 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms