RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 ALPK2Q86TB3 2170 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 YRDCQ86U90 279 aaKnown RBP9.35□□□□□ -0.91
SSX3-204ENST00000612497 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 CILP2Q8IUL8 1156 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 GRAMD2AQ8IUY3 354 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 C9orf40Q8IXQ3 194 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 ZNF611Q8N823 705 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 GPATCH11Q8N954 259 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 CNEP1R1Q8N9A8 125 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 CD200R1Q8TD46 325 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 SLC5A11Q8WWX8 675 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 ATL1Q8WXF7 558 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 ALG3Q92685 438 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 KCNJ9Q92806 393 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 NEIL2Q969S2 332 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 GTPBP3Q969Y2 492 aaKnown RBP9.35□□□□□ -0.91
SSX3-204ENST00000612497 GAL3ST3Q96A11 431 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 SENP5Q96HI0 755 aaPredicted RBP9.35□□□□□ -0.91
SSX3-204ENST00000612497 HIST1H2AHQ96KK5 128 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 ART5Q96L15 291 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 RILPQ96NA2 401 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 GAL3ST4Q96RP7 486 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 KRT12Q99456 494 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 HIST1H2AJQ99878 128 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 AIF1LQ9BQI0 150 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 SLC39A3Q9BRY0 314 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 H2AFJQ9BTM1 129 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 INTS10Q9NVR2 710 aaKnown RBP9.35□□□□□ -0.91
SSX3-204ENST00000612497 BFARQ9NZS9 450 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 TFR2Q9UP52 801 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 MAPRE3Q9UPY8 281 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 IKBKGQ9Y6K9 419 aa9.35□□□□□ -0.91
SSX3-204ENST00000612497 PRR14LQ5THK1 2151 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 A0A088AWK7 358 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 PABPN1LA6NDY0 278 aaKnown RBP9.34□□□□□ -0.91
SSX3-204ENST00000612497 TP53I11O14683 189 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ADAM11O75078 769 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 SNX4O95219 450 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 COX7A2P14406 83 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ETS1P14921 441 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ZNF10P21506 573 aaPredicted RBP9.34□□□□□ -0.91
SSX3-204ENST00000612497 MGAT1P26572 445 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 STIP1P31948 543 aaKnown RBP9.34□□□□□ -0.91
SSX3-204ENST00000612497 NPY2RP49146 381 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 PLA2G16P53816 162 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 MTTPP55157 894 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 RCN2Q14257 317 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 DUPD1Q68J44 220 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 NEPROQ6NW34 567 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ZNF549Q6P9A3 640 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ZNF474Q6S9Z5 364 aaPredicted RBP9.34□□□□□ -0.91
SSX3-204ENST00000612497 SCIMPQ6UWF3 145 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 C22orf34Q6ZV56 151 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 PRUNE1Q86TP1 453 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 KLHDC8AQ8IYD2 350 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 FAM83FQ8NEG4 500 aaPredicted RBP9.34□□□□□ -0.91
SSX3-204ENST00000612497 OR56A3Q8NH54 315 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 CCT6BQ92526 530 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 STARD4Q96DR4 205 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 PGM2Q96G03 612 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 UCN2Q96RP3 112 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 KIFC1Q9BW19 673 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 OPN3Q9H1Y3 402 aaPredicted RBP9.34□□□□□ -0.91
SSX3-204ENST00000612497 SLCO5A1Q9H2Y9 848 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ARL15Q9NXU5 204 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 ELOVL5Q9NYP7 299 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 DYRK1BQ9Y463 629 aa9.34□□□□□ -0.91
SSX3-204ENST00000612497 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 LRRC14BA6NHZ5 514 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 BTNL10A8MVZ5 291 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 EIF3FO00303 357 aaPredicted RBP9.33□□□□□ -0.92
SSX3-204ENST00000612497 KLF4O43474 513 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 DYRK3O43781 588 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 SRD5A1P18405 259 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 PAMP19021 973 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 CHMP24386 653 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 HNRNPH1P31943 449 aaKnown RBP9.33□□□□□ -0.92
SSX3-204ENST00000612497 CDKN1AP38936 164 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 LIM2P55344 173 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 DHX9Q08211 1270 aaKnown RBP9.33□□□□□ -0.92
SSX3-204ENST00000612497 SP140Q13342 867 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 NTRK2Q16620 822 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 FNDC7Q5VTL7 733 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 LIPNQ5VXI9 398 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 ZNF470Q6ECI4 717 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 LRRC8EQ6NSJ5 796 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 VWA1Q6PCB0 445 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 ENPP6Q6UWR7 440 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 TMEM64Q6YI46 380 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 SLC29A4Q7RTT9 530 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 P4HA3Q7Z4N8 544 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 ADGRE4PQ86SQ3 457 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 TMPRSS11BQ86T26 416 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 LUZP1Q86V48 1076 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 EEF1AKMT1Q8WVE0 214 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 ATG4AQ8WYN0 398 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 AKAP1Q92667 903 aaKnown RBP eCLIP9.33□□□□□ -0.92
SSX3-204ENST00000612497 MS4A6EQ96DS6 147 aa9.33□□□□□ -0.92
SSX3-204ENST00000612497 KLHL4Q9C0H6 718 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms