RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 NME2P1O60361 137 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 ETHE1O95571 254 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 AIFM1O95831 613 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 GBAP04062 536 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 NUDT17P0C025 328 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 SBK3P0C264 359 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF24P17028 368 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 NME2P22392 152 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 GALNSP34059 522 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 GSTM5P46439 218 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 TRA2BP62995 288 aaKnown RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 RNF4P78317 190 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 IGLV3-21P80748 117 aaPredicted RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 SPDYAQ5MJ70 313 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 NDUFAF5Q5TEU4 345 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 MRM1Q6IN84 353 aaKnown RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 MTFR2Q6P444 385 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 RPS27LQ71UM5 84 aaKnown RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 COMMD6Q7Z4G1 85 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 DND1Q8IYX4 353 aaKnown RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 SAMD14Q8IZD0 417 aaPredicted RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 EID3Q8N140 333 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 ARMC10Q8N2F6 343 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 TMEM151AQ8N4L1 468 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 MZB1Q8WU39 189 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 PTPMT1Q8WUK0 201 aaPredicted RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 ANKRD9Q96BM1 317 aaPredicted RBP11.47□□□□□ -0.57
CBWD3-208ENST00000612050 FBXL20Q96IG2 436 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 PFDN4Q9NQP4 134 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 OSGIN2Q9Y236 505 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF780BQ9Y6R6 833 aa11.47□□□□□ -0.57
CBWD3-208ENST00000612050 CNTRLQ7Z7A1 2325 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 A0A1W2PR48 441 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 GLOD5A6NK44 160 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 TGFBR3LH3BV60 316 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 WWP2O00308 870 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 TFECO14948 347 aaPredicted RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 TMPRSS11DO60235 418 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 PLIN3O60664 434 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 OR2J2O76002 312 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 NEURL1O76050 574 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 UNC5CO95185 931 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 PROCP04070 461 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 SLC35E2P0CK97 266 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 NT5EP21589 574 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 ALDH9A1P49189 494 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 NAGLUP54802 743 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 DNAJB13P59910 316 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 ERVK-8P63133 956 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 ZNF267Q14586 743 aaPredicted RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 HEPACAMQ14CZ8 416 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 SPRED3Q2MJR0 410 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 C4orf17Q53FE4 359 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 LIPMQ5VYY2 423 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 PAOXQ6QHF9 649 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 IL20RBQ6UXL0 311 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 RTL4Q6ZR62 310 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 CROCCP2Q86T23 111 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 GALNT12Q8IXK2 581 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 TAGAPQ8N103 731 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 C4orf33Q8N1A6 199 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 SLC15A4Q8N697 577 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 C1orf52Q8N6N3 182 aaKnown RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 NUBPLQ8TB37 319 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 CAVIN3Q969G5 261 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 SENP5Q96HI0 755 aaPredicted RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 APOPT1Q96IL0 206 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 SGCZQ96LD1 299 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 TAAR6Q96RI8 345 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 GAL3ST4Q96RP7 486 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 NPAS2Q99743 824 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 TRIM45Q9H8W5 580 aaPredicted RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 RRAGDQ9NQL2 400 aaPredicted RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 FARSBQ9NSD9 589 aaKnown RBP11.46□□□□□ -0.57
CBWD3-208ENST00000612050 SENP1Q9P0U3 644 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 ERVK-19Q9WJR5 959 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 CFL2Q9Y281 166 aa11.46□□□□□ -0.57
CBWD3-208ENST00000612050 PCDH7O60245 1069 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 MAN1A2O60476 641 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 ERAL1O75616 437 aaKnown RBP11.45□□□□□ -0.58
CBWD3-208ENST00000612050 P04436 131 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 MYZAPP0CAP1 466 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 PORP16435 677 aaPredicted RBP11.45□□□□□ -0.58
CBWD3-208ENST00000612050 CSNK2A2P19784 350 aaPredicted RBP11.45□□□□□ -0.58
CBWD3-208ENST00000612050 TMED10P49755 219 aaKnown RBP11.45□□□□□ -0.58
CBWD3-208ENST00000612050 HK2P52789 917 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 NRG3P56975 720 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 PLGLB1Q02325 96 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 MPEG1Q2M385 716 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 GK5Q6ZS86 529 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 SRRM1Q8IYB3 904 aaKnown RBP11.45□□□□□ -0.58
CBWD3-208ENST00000612050 GHDCQ8N2G8 530 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 AGAP11Q8TF27 550 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 PPWD1Q96BP3 646 aaKnown RBP11.45□□□□□ -0.58
CBWD3-208ENST00000612050 KLHL29Q96CT2 875 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 RASL10BQ96S79 203 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 TRMOQ9BU70 441 aa11.45□□□□□ -0.58
CBWD3-208ENST00000612050 ZNF717Q9BY31 904 aaPredicted RBP11.45□□□□□ -0.58
CBWD3-208ENST00000612050 SHCBP1LQ9BZQ2 653 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms