RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 SLBPQ14493 270 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00116-203ENST00000611969 TBCCQ15814 346 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 KBTBD12Q3ZCT8 623 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 TOR1AIP1Q5JTV8 583 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 RAPH1Q70E73 1250 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 TBC1D1Q86TI0 1168 aaPredicted RBP12.68□□□□□ -0.38
LINC00116-203ENST00000611969 GPALPP1Q8IXQ4 340 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 PPM1NQ8N819 430 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 TNIP2Q8NFZ5 429 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 UBE2E3Q969T4 207 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 SARAFQ96BY9 339 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 WDR34Q96EX3 536 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 PTCD3Q96EY7 689 aaKnown RBP12.68□□□□□ -0.38
LINC00116-203ENST00000611969 SCYL1Q96KG9 808 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 Q96MF0 132 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 FAM173AQ9BQD7 235 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 CD244Q9BZW8 370 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 ROGDIQ9GZN7 287 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 KLHL31Q9H511 634 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 LDAHQ9H6V9 325 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 CAB39LQ9H9S4 337 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 PNO1Q9NRX1 252 aaKnown RBP12.68□□□□□ -0.38
LINC00116-203ENST00000611969 RNF112Q9ULX5 631 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 MRPS33Q9Y291 106 aaKnown RBP12.68□□□□□ -0.38
LINC00116-203ENST00000611969 ACOT9Q9Y305 439 aa12.68□□□□□ -0.38
LINC00116-203ENST00000611969 TRGV5A0A0B4J1U4 118 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 TRIM64A6NGJ6 449 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 TRIM64BA6NI03 449 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 HSPB2A8KAH6 182 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 FAM47E-STBD1D6RA91 191 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 DVL2O14641 736 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 B3GALT2O43825 422 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 C1QAP02745 245 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 HRGP04196 525 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 CCL3P10147 92 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 HSD17B7P56937 341 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 GUCY2DQ02846 1103 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 PCDH1Q08174 1060 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 TERF2Q15554 542 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 HSPB2Q16082 182 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 PDK4Q16654 411 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 ADPRMQ3LIE5 342 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 ISCA2Q86U28 154 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 ULK2Q8IYT8 1036 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 CA13Q8N1Q1 262 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 SPATA6LQ8N4H0 392 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 PDPRQ8NCN5 879 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 OR2L5Q8NG80 312 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 FBF1Q8TES7 1133 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 ZNF592Q92610 1267 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 MS4A6EQ96DS6 147 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 SLC6A15Q9H2J7 730 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 EXO5Q9H790 373 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 MYOTQ9UBF9 498 aa12.67□□□□□ -0.38
LINC00116-203ENST00000611969 ERI3O43414 337 aaKnown RBP12.66□□□□□ -0.38
LINC00116-203ENST00000611969 ZFAND5O76080 213 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 GABRA1P14867 456 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 CNR1P21554 472 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 PHBP35232 272 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 HSPA7P48741 367 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 HNRNPFP52597 415 aaKnown RBP12.66□□□□□ -0.38
LINC00116-203ENST00000611969 PPP2R2BQ00005 443 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 IRF8Q02556 426 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 DOC2AQ14183 400 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 EFTUD2Q15029 972 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00116-203ENST00000611969 OR4D1Q15615 310 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 FAM83EQ2M2I3 478 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 HYAL4Q2M3T9 481 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 C18orf21Q32NC0 220 aaPredicted RBP12.66□□□□□ -0.38
LINC00116-203ENST00000611969 TRIM40Q6P9F5 258 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 RTL4Q6ZR62 310 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 FAM47EQ6ZV65 393 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 LRRC70Q7Z2Q7 622 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 SCUBE1Q8IWY4 988 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 SNX31Q8N9S9 440 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 TMEM52Q8NDY8 209 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 CCT6BQ92526 530 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 SERINC2Q96SA4 455 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 CCDC77Q9BR77 488 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 REXO4Q9GZR2 422 aaKnown RBP12.66□□□□□ -0.38
LINC00116-203ENST00000611969 AICDAQ9GZX7 198 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 ZNF703Q9H7S9 590 aaPredicted RBP12.66□□□□□ -0.38
LINC00116-203ENST00000611969 TRPS1Q9UHF7 1281 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 ADGRE2Q9UHX3 823 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 ZNF490Q9ULM2 529 aaPredicted RBP12.66□□□□□ -0.38
LINC00116-203ENST00000611969 ATG4BQ9Y4P1 393 aa12.66□□□□□ -0.38
LINC00116-203ENST00000611969 RAI1Q7Z5J4 1906 aaPredicted RBP12.65□□□□□ -0.38
LINC00116-203ENST00000611969 A0A087X1B8 175 aa12.65□□□□□ -0.38
LINC00116-203ENST00000611969 SYCE1LA8MT33 242 aa12.65□□□□□ -0.38
LINC00116-203ENST00000611969 CCNT2O60583 730 aaKnown RBP12.65□□□□□ -0.38
LINC00116-203ENST00000611969 LTA4HP09960 611 aaKnown RBP12.65□□□□□ -0.38
LINC00116-203ENST00000611969 RFPL3SP0C7P2 107 aa12.65□□□□□ -0.38
LINC00116-203ENST00000611969 SERPINB1P30740 379 aa12.65□□□□□ -0.38
LINC00116-203ENST00000611969 CEACAM8P31997 349 aaPredicted RBP12.65□□□□□ -0.38
LINC00116-203ENST00000611969 KCNC1P48547 511 aa12.65□□□□□ -0.38
LINC00116-203ENST00000611969 ZNF136P52737 540 aa12.65□□□□□ -0.38
LINC00116-203ENST00000611969 HK2P52789 917 aa12.65□□□□□ -0.38
LINC00116-203ENST00000611969 MTTPP55157 894 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms