RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 SYNDIG1LA6NDD5 238 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 LRRC3CA6NJW4 275 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 FAM166BA8MTA8 275 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 A8MVJ9 347 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 E5RI56 91 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 H3BS24 57 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ACOT7O00154 380 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 CYR61O00622 381 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 AVILO75366 819 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ZFAND5O76080 213 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 MYO1DO94832 1006 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SYF2O95926 243 aaKnown RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 FTCDO95954 541 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 HRGP04196 525 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 CD3EP07766 207 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SERPINA6P08185 405 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 F7P08709 466 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 MLNP12872 115 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 GABRA1P14867 456 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 IFNGR1P15260 489 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 GABRB3P28472 473 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 TIMP3P35625 211 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 GRK3P35626 688 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SOX3P41225 446 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SLC1A2P43004 574 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ASCL1P50553 236 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 HNRNPFP52597 415 aaKnown RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 HK2P52789 917 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 NAE1Q13564 534 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 TSTA3Q13630 321 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 ELAVL1Q15717 326 aaKnown RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 PPP1R3AQ16821 1122 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ZNF791Q3KP31 576 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 CATSPEREQ5SY80 951 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 THEMIS2Q5TEJ8 643 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 DUPD1Q68J44 220 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ZNF470Q6ECI4 717 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 UGT3A1Q6NUS8 523 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 RTL4Q6ZR62 310 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ABHD13Q7L211 337 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 CXXC5Q7LFL8 322 aaKnown RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 THNSL2Q86YJ6 484 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 KLHDC8AQ8IYD2 350 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ULK2Q8IYT8 1036 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SYCE1Q8N0S2 351 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 PLD6Q8N2A8 252 aaKnown RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 TMEM156Q8N614 296 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ACRBPQ8NEB7 543 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 PTPMT1Q8WUK0 201 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 C1orf54Q8WWF1 131 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SLCO2A1Q92959 643 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 NEIL2Q969S2 332 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 NCLNQ969V3 563 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SNF8Q96H20 258 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 QRFPRQ96P65 431 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 CNPPD1Q9BV87 410 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 NPLQ9BXD5 320 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 ATG10Q9H0Y0 220 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 KLHL31Q9H511 634 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ADAP2Q9NPF8 381 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SEMA4BQ9NPR2 832 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 BEX4Q9NWD9 120 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 HPF1Q9NWY4 346 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 QPCTLQ9NXS2 382 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ZNF629Q9UEG4 869 aaPredicted RBP6.52□□□□□ -1.37
CLK4-214ENST00000611575 EDARQ9UNE0 448 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ZNF148Q9UQR1 794 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 ZKSCAN5Q9Y2L8 839 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 IKBKGQ9Y6K9 419 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 SVEP1Q4LDE5 3571 aa6.52□□□□□ -1.37
CLK4-214ENST00000611575 AKAP6Q13023 2319 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 MAGEB16A2A368 324 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 HSPB2A8KAH6 182 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 FAM171A2A8MVW0 826 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 KDM4EB2RXH2 506 aaPredicted RBP6.51□□□□□ -1.37
CLK4-214ENST00000611575 OR1F1O43749 312 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 HAUS5O94927 633 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 EPPINO95925 133 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 IGKV3-11P04433 115 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 THBDP07204 575 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 RFPL3SP0C7P2 107 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 CCL3P10147 92 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 ECI1P42126 302 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 ZNF136P52737 540 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 DGKQP52824 942 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 AP1S2P56377 157 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 SNTB1Q13884 538 aaKnown RBP6.51□□□□□ -1.37
CLK4-214ENST00000611575 RUNX2Q13950 521 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 HSPB2Q16082 182 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 MPEG1Q2M385 716 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 ACSF3Q4G176 576 aaPredicted RBP6.51□□□□□ -1.37
CLK4-214ENST00000611575 SHEQ5VZ18 495 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 ZNF585AQ6P3V2 769 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 SBSNQ6UWP8 590 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 PRSS57Q6UWY2 283 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 CLEC9AQ6UXN8 241 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 CNTN4Q8IWV2 1026 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 ZNF595Q8IYB9 648 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 LRRC75A-AS1Q8N1F1 130 aa6.51□□□□□ -1.37
CLK4-214ENST00000611575 FBXW8Q8N3Y1 598 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms