RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 OLFM2O95897 454 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 HTR2BP41595 481 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 C22orf42Q6IC83 251 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 C22orf39Q6P5X5 142 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 GPR65Q8IYL9 337 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 ZSCAN32Q9NX65 697 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 HS3ST2Q9Y278 367 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 DYRK1BQ9Y463 629 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 WWP2O00308 870 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 TBX19O60806 448 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 SLC43A1O75387 559 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 ABLIM3O94929 683 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 SLC10A3P09131 477 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 CYP2A6P11509 494 aaPredicted RBP21.26■□□□□ 0.99
SHANK2-220ENST00000608988 CFL1P23528 166 aaKnown RBP21.26■□□□□ 0.99
SHANK2-220ENST00000608988 CLDN20P56880 219 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 MXD1Q05195 221 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 SEC23BQ15437 767 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 TATDN3Q17R31 274 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 LEXMQ3ZCV2 418 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 ADNP2Q6IQ32 1131 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 CEACAM20Q6UY09 585 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 OTOP2Q7RTS6 562 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 NPAS4Q8IUM7 802 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 CAMKK1Q8N5S9 505 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 TRAM1L1Q8N609 369 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 ZNF461Q8TAF7 563 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 SUN5Q8TC36 379 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 UBE2E3Q969T4 207 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 GIMAP4Q9NUV9 329 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 LRFN2Q9ULH4 789 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 SATB2Q9UPW6 733 aa21.26■□□□□ 0.99
SHANK2-220ENST00000608988 EXOSC1Q9Y3B2 195 aaKnown RBP21.26■□□□□ 0.99
SHANK2-220ENST00000608988 SLC5A10A0PJK1 596 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 NPC1O15118 1278 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 EFEMP2O95967 443 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 CCNYL3P0C7X3 344 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 C1GALT1C1LP0DN25 315 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 SLC2A2P11168 524 aaPredicted RBP21.25■□□□□ 0.99
SHANK2-220ENST00000608988 GABRA5P31644 462 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 RAB40BQ12829 278 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 TCTN3Q6NUS6 607 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 TMPRSS11BQ86T26 416 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 HS6ST3Q8IZP7 471 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 CADM2Q8N3J6 435 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 FAM109AQ8N4B1 249 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 OR5AK3PQ8NH89 298 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 HCAR2Q8TDS4 363 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 UFD1Q92890 307 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 NEIL2Q969S2 332 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 KATNB1Q9BVA0 655 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 PPP1R3EQ9H7J1 279 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 MRPL39Q9NYK5 338 aaKnown RBP21.25■□□□□ 0.99
SHANK2-220ENST00000608988 SF3B6Q9Y3B4 125 aaKnown RBP21.25■□□□□ 0.99
SHANK2-220ENST00000608988 SPIN1Q9Y657 262 aaPredicted RBP21.25■□□□□ 0.99
SHANK2-220ENST00000608988 ALG5Q9Y673 324 aa21.25■□□□□ 0.99
SHANK2-220ENST00000608988 ORC5O43913 435 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 SLC16A8O95907 504 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 M6PRP20645 277 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 TAS2R50P59544 299 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 SF3A2Q15428 464 aaKnown RBP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 CD200R1LQ6Q8B3 271 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 BCL7CQ8WUZ0 217 aaPredicted RBP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 DEDD2Q8WXF8 326 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 AP2M1Q96CW1 435 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 ZNF354BQ96LW1 612 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 MKRN2Q9H000 416 aaKnown RBP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 ADAM30Q9UKF2 790 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 NDRG2Q9UN36 371 aaKnown RBP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 SGK494L7N484 410 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 CPNE3O75131 537 aaKnown RBP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 ATG13O75143 517 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 SH3BGRLO75368 114 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 SOX14O95416 240 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 CLEC2LP0C7M8 214 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 FEN1P39748 380 aaKnown RBP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 ETV5P41161 510 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 TGM4P49221 684 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 ETV1P50549 477 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 GPLD1P80108 840 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 SLBPQ14493 270 aaKnown RBP eCLIP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 SYT14P1Q58G82 188 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 ATAT1Q5SQI0 421 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 TMEM173Q86WV6 379 aaPredicted RBP21.24■□□□□ 0.99
SHANK2-220ENST00000608988 TRIM48Q8IWZ4 208 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 GPR32P1Q8NGA4 272 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 OR5P2Q8WZ92 322 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 MARVELD3Q96A59 401 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 ZNF607Q96SK3 696 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 MARVELD1Q9BSK0 173 aa21.24■□□□□ 0.99
SHANK2-220ENST00000608988 TRDV1A0A1B0GX56 115 aa21.23■□□□□ 0.99
SHANK2-220ENST00000608988 PIPSLA2A3N6 862 aa21.23■□□□□ 0.99
SHANK2-220ENST00000608988 FAM227AF5H4B4 570 aa21.23■□□□□ 0.99
SHANK2-220ENST00000608988 CELF2O95319 508 aaKnown RBP21.23■□□□□ 0.99
SHANK2-220ENST00000608988 CSF2P04141 144 aa21.23■□□□□ 0.99
SHANK2-220ENST00000608988 TP53P04637 393 aaPredicted RBP21.23■□□□□ 0.99
SHANK2-220ENST00000608988 FAM157BP0CG42 384 aa21.23■□□□□ 0.99
SHANK2-220ENST00000608988 VIPR1P32241 457 aa21.23■□□□□ 0.99
SHANK2-220ENST00000608988 BDKRB1P46663 353 aa21.23■□□□□ 0.99
SHANK2-220ENST00000608988 OR3A3P47888 321 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms