RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 STX4Q12846 297 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 LTB4RQ15722 352 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 NSDHLQ15738 373 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 FAM174BQ3ZCQ3 159 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 TIGD2Q4W5G0 525 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 AGKQ53H12 422 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 SPANXN4Q5MJ08 99 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ATP1A1-AS1Q5TC04 95 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 OR4F3Q6IEY1 312 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 UNQ6494/PRO21346Q6UXR6 183 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 DGAT2L6Q6ZPD8 337 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 GK5Q6ZS86 529 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 MED25Q71SY5 747 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 PPP1R32Q7Z5V6 425 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ANKRD37Q7Z713 158 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 MTDHQ86UE4 582 aaKnown RBP7.2□□□□□ -1.26
MSH6-211ENST00000606499 FUNDC1Q8IVP5 155 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 FAM9CQ8IZT9 166 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 AMER2Q8N7J2 671 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 OR4K14Q8NGD5 310 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 DOK4Q8TEW6 326 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 STARD8Q92502 1023 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 PPWD1Q96BP3 646 aaKnown RBP7.2□□□□□ -1.26
MSH6-211ENST00000606499 TESCQ96BS2 214 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 MTERF3Q96E29 417 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ZNF681Q96N22 645 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 DCBLD2Q96PD2 775 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ZBTB18Q99592 522 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 SLC35C2Q9NQQ7 365 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 SAR1AQ9NR31 198 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ZIM2Q9NZV7 527 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 CCDC167Q9P0B6 97 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 SH3BP4Q9P0V3 963 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 KCND3Q9UK17 655 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ENTPD4Q9Y227 616 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 WBP11Q9Y2W2 641 aaKnown RBP7.2□□□□□ -1.26
MSH6-211ENST00000606499 MMACHCQ9Y4U1 282 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 HS3ST3B1Q9Y662 390 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 ZNF780BQ9Y6R6 833 aa7.2□□□□□ -1.26
MSH6-211ENST00000606499 FAM234BA2RU67 622 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ASPDHA6ND91 283 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 A8MUA0 341 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 SOCS6O14544 535 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 OR10H2O60403 315 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 TBX19O60806 448 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 CREG1O75629 220 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 SEC24DO94855 1032 aaPredicted RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 IFNA16P05015 189 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 CD63P08962 238 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 PRKAR1AP10644 381 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 CPMP14384 443 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 PORP16435 677 aaPredicted RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 CAPN3P20807 821 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 NTSP30990 170 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 RPL3P39023 403 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 EIF2S3P41091 472 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 XKP51811 444 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 POLR2JP52435 117 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 PHC1P78364 1004 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 IRX1P78414 480 aaPredicted RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 PLIN5Q00G26 463 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 KLF10Q13118 480 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 RCAN2Q14206 197 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 SFT2D3Q587I9 215 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 CPTPQ5TA50 214 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 TMEM205Q6UW68 189 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ZNF551Q7Z340 670 aaPredicted RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 R3HCC1LQ7Z5L2 792 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 CAMKMTQ7Z624 323 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 MRGPREQ86SM8 312 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ANKRD46Q86W74 232 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 CLECL1Q8IZS7 167 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 LRRC25Q8N386 305 aaPredicted RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 CPSF7Q8N684 471 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 CCDC197Q8NCU1 140 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 PLPP5Q8NEB5 264 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ADCY4Q8NFM4 1077 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 SUN3Q8TAQ9 357 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 METTL21AQ8WXB1 218 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ZCCHC14Q8WYQ9 949 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 VPS33AQ96AX1 596 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 COQ8BQ96D53 544 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ZNF764Q96H86 408 aaPredicted RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 AMDHD1Q96NU7 426 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 DGAT2Q96PD7 388 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 BBS4Q96RK4 519 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 PRPF18Q99633 342 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 DUSP26Q9BV47 211 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ALOXE3Q9BYJ1 711 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 DPH1Q9BZG8 443 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 FAM117AQ9C073 453 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 MYLK2Q9H1R3 596 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 PNO1Q9NRX1 252 aaKnown RBP7.19□□□□□ -1.26
MSH6-211ENST00000606499 SEMA3GQ9NS98 782 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 ATAD3AQ9NVI7 634 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 TAS2R7Q9NYW3 318 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 PSME2Q9UL46 239 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 RAXQ9Y2V3 346 aa7.19□□□□□ -1.26
MSH6-211ENST00000606499 LOC102723996A0A087X1L8 192 aa7.18□□□□□ -1.26
MSH6-211ENST00000606499 IGHV1-45A0A0A0MS14 117 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms