RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 TEX35Q5T0J7 233 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 OR4F6Q8NGB9 312 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 NUBPLQ8TB37 319 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 ZNF483Q8TF39 744 aaPredicted RBP16.78■□□□□ 0.28
CCDC12-208ENST00000603885 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 CNPPD1Q9BV87 410 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 C1QTNF3Q9BXJ4 246 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 DEPPQ9NTK1 212 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 ENTPD4Q9Y227 616 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 KLF2Q9Y5W3 355 aaPredicted RBP16.78■□□□□ 0.28
CCDC12-208ENST00000603885 GTF3C1Q12789 2109 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 PCNX1Q96RV3 2341 aa16.78■□□□□ 0.28
CCDC12-208ENST00000603885 CACNA1DQ01668 2161 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 ARHGAP10A1A4S6 786 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 PRRG2O14669 202 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 CDC40O60508 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC12-208ENST00000603885 GBAP04062 536 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 SBK3P0C264 359 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 TAC1P20366 129 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 SMSP52788 366 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 ASPHQ12797 758 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 MPEG1Q2M385 716 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 OR52E8Q6IFG1 317 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 DGAT2L6Q6ZPD8 337 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 RPS27LQ71UM5 84 aaKnown RBP16.77■□□□□ 0.28
CCDC12-208ENST00000603885 PAGE2Q7Z2X7 111 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 LCA5Q86VQ0 697 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 CHERPQ8IWX8 916 aaKnown RBP16.77■□□□□ 0.28
CCDC12-208ENST00000603885 C9orf40Q8IXQ3 194 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 TMEM151AQ8N4L1 468 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 GOLM1Q8NBJ4 401 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 MYRIPQ8NFW9 859 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 OR2M7Q8NG81 312 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 SGCZQ96LD1 299 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 ADAM29Q9UKF5 820 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 MEMO1Q9Y316 297 aa16.77■□□□□ 0.28
CCDC12-208ENST00000603885 IQANK1A0A1B0GTG1 560 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ACOT7O00154 380 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 HRKO00198 91 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ZNHIT1O43257 154 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 CDH13P55290 713 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 HERVK_113P63132 956 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ERVK-8P63133 956 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ADORA2A-AS1P86434 159 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 PLGLB1Q02325 96 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ZNF267Q14586 743 aaPredicted RBP16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ZNF750Q32MQ0 723 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 CMPK2Q5EBM0 449 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 SGO1Q5FBB7 561 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 PIGGQ5H8A4 983 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 LETMD1Q6P1Q0 360 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 XKRXQ6PP77 449 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 GK5Q6ZS86 529 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 SLC29A4Q7RTT9 530 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 FGD2Q7Z6J4 655 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 CNPY4Q8N129 248 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 EID3Q8N140 333 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 SLC22A8Q8TCC7 542 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 AGAP11Q8TF27 550 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 RIT1Q92963 219 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ERVK-6Q9BXR3 956 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 MRPL1Q9BYD6 325 aaKnown RBP16.76■□□□□ 0.27
CCDC12-208ENST00000603885 SACM1LQ9NTJ5 587 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 TEX10Q9NXF1 929 aaPredicted RBP16.76■□□□□ 0.27
CCDC12-208ENST00000603885 FETUBQ9UGM5 382 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 SNX6Q9UNH7 406 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 ERVK-19Q9WJR5 959 aa16.76■□□□□ 0.27
CCDC12-208ENST00000603885 A0A1B0GTH9 108 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 A0A1B0GTL3 188 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 WASHC1A8K0Z3 465 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 HNRNPRO43390 633 aaKnown RBP16.75■□□□□ 0.27
CCDC12-208ENST00000603885 ZNF354AO60765 605 aaPredicted RBP16.75■□□□□ 0.27
CCDC12-208ENST00000603885 KLK1P06870 262 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 FAM153BP0C7A2 387 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 SLC35E2P0CK97 266 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 TSPAN8P19075 237 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 AGAP20933 346 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 CNR1P21554 472 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 PIK3R1P27986 724 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 GALNSP34059 522 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 PTGS2P35354 604 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 PPIAP62937 165 aaKnown RBP16.75■□□□□ 0.27
CCDC12-208ENST00000603885 SLC29A2Q14542 456 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 FAM153CQ494X1 144 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 CCNYL2Q5T2Q4 361 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 SP5Q6BEB4 398 aaPredicted RBP16.75■□□□□ 0.27
CCDC12-208ENST00000603885 RNF111Q6ZNA4 994 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 RGS9BPQ6ZS82 235 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 DOLPP1Q86YN1 238 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 SLC15A4Q8N697 577 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 FAM57AQ8TBR7 257 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 TRPC4APQ8TEL6 797 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 DOK4Q8TEW6 326 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 SELENOMQ8WWX9 145 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 GAL3ST4Q96RP7 486 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 FAM173AQ9BQD7 235 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 BRF2Q9HAW0 419 aa16.75■□□□□ 0.27
CCDC12-208ENST00000603885 TMEM216Q9P0N5 145 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms