RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 ABHD2P08910 425 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 TSPAN8P19075 237 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 GCAP28676 217 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 PTGS2P35354 604 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 SMSP52788 366 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 HERVK_113P63132 956 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 ERVK-8P63133 956 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 PLGLB1Q02325 96 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 ASPHQ12797 758 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 IFT88Q13099 833 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 OPN5Q6U736 354 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 RTL4Q6ZR62 310 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 DOLPP1Q86YN1 238 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 ST13P4Q8IZP2 240 aaPredicted RBP15.16■□□□□ 0.02
TUBE1-206ENST00000603722 OR2M7Q8NG81 312 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 OR4F6Q8NGB9 312 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 OR52N2Q8NGI0 321 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 NUBPLQ8TB37 319 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 UCN3Q969E3 161 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 FBXL20Q96IG2 436 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 ART5Q96L15 291 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 ERVK-6Q9BXR3 956 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 ELOVL6Q9H5J4 265 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 WDR41Q9HAD4 459 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 PPT2Q9UMR5 302 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 ERVK-19Q9WJR5 959 aa15.16■□□□□ 0.02
TUBE1-206ENST00000603722 A0A1B0GTL3 188 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 PDE9AO76083 593 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 TPOP07202 933 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 SBK3P0C264 359 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 HTR1EP28566 365 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 NR0B1P51843 470 aaKnown RBP15.15■□□□□ 0.02
TUBE1-206ENST00000603722 CDH13P55290 713 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 PPIAP62937 165 aaKnown RBP15.15■□□□□ 0.02
TUBE1-206ENST00000603722 BIKQ13323 160 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 GGTA1PQ4G0N0 100 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 SGO1Q5FBB7 561 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 TEX35Q5T0J7 233 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 FAM219BQ5XKK7 198 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 OR52E8Q6IFG1 317 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 MILR1Q7Z6M3 343 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 CD163Q86VB7 1156 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 IFT20Q8IY31 132 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 ZNF483Q8TF39 744 aaPredicted RBP15.15■□□□□ 0.02
TUBE1-206ENST00000603722 GAL3ST4Q96RP7 486 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 PELOQ9BRX2 385 aaKnown RBP15.15■□□□□ 0.02
TUBE1-206ENST00000603722 MRPL1Q9BYD6 325 aaKnown RBP15.15■□□□□ 0.02
TUBE1-206ENST00000603722 TTTY12Q9BZ98 90 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 TEX10Q9NXF1 929 aaPredicted RBP15.15■□□□□ 0.02
TUBE1-206ENST00000603722 SCN2AQ99250 2005 aa15.15■□□□□ 0.02
TUBE1-206ENST00000603722 IQANK1A0A1B0GTG1 560 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 A0A1W2PS29 197 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 ACOT7O00154 380 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 PPP6CO00743 305 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 RIPK2O43353 540 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 OTCP00480 354 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 KLK1P06870 262 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 RHOXF2BP0C7M4 288 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 CCL3P10147 92 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 PRF1P14222 555 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 ZNF267Q14586 743 aaPredicted RBP15.14■□□□□ 0.01
TUBE1-206ENST00000603722 CDSNQ15517 529 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 ZNF630Q2M218 657 aaPredicted RBP15.14■□□□□ 0.01
TUBE1-206ENST00000603722 MPEG1Q2M385 716 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 SPRED3Q2MJR0 410 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 PIGGQ5H8A4 983 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 C10orf62Q5T681 223 aaPredicted RBP15.14■□□□□ 0.01
TUBE1-206ENST00000603722 LGSNQ5TDP6 509 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 LETMD1Q6P1Q0 360 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 XKRXQ6PP77 449 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 GK5Q6ZS86 529 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 TRMT10CQ7L0Y3 403 aaKnown RBP15.14■□□□□ 0.01
TUBE1-206ENST00000603722 TMEM151AQ8N4L1 468 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 GOLM1Q8NBJ4 401 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 SLC22A8Q8TCC7 542 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 RIT1Q92963 219 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 MTBPQ96DY7 904 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 SGCZQ96LD1 299 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 RHOXF2Q9BQY4 288 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 DEFB127Q9H1M4 99 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 FARSBQ9NSD9 589 aaKnown RBP15.14■□□□□ 0.01
TUBE1-206ENST00000603722 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.14■□□□□ 0.01
TUBE1-206ENST00000603722 SLC12A4Q9UP95 1085 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 CSMD1Q96PZ7 3565 aa15.14■□□□□ 0.01
TUBE1-206ENST00000603722 TEX15Q9BXT5 2789 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 E9PLN8 166 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 ADAM10O14672 748 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 PGRMC2O15173 223 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 NADKO95544 446 aaPredicted RBP15.13■□□□□ 0.01
TUBE1-206ENST00000603722 P04436 131 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 AGAP20933 346 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 CNR1P21554 472 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 DNASE1L1P49184 302 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 NDUFAF5Q5TEU4 345 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 ARHGAP11AQ6P4F7 1023 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 RNF111Q6ZNA4 994 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 TIFABQ6ZNK6 161 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 FAM47EQ6ZV65 393 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 SLC29A4Q7RTT9 530 aa15.13■□□□□ 0.01
TUBE1-206ENST00000603722 SLC22A16Q86VW1 577 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms