RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 R3HCC1LQ7Z5L2 792 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 ZDHHC21Q8IVQ6 265 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 SPARTQ8N0X7 666 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 EID2Q8N6I1 236 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PIK3C3Q8NEB9 887 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 OR2I1PQ8NGU4 316 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 OR2T29Q8NH02 315 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 B4GALNT2Q8NHY0 566 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 NUDT8Q8WV74 236 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 RGMAQ96B86 450 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 OR2A5Q96R48 311 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PANX1Q96RD7 426 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 F2RL3Q96RI0 385 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 INPP5KQ9BT40 448 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 REXO4Q9GZR2 422 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 SMOC1Q9H4F8 434 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 TMEFF2Q9UIK5 374 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 PILRAQ9UKJ1 303 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 KMT2EQ8IZD2 1858 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 GNG14A0A1W2PPG7 69 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 LRIT2A6NDA9 550 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 TLCD2A6NGC4 264 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PCDH7O60245 1069 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 CTSVO60911 334 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 JRKO75564 520 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ATE1O95260 518 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 KCNK5O95279 499 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 SLC35G6P0C7Q6 338 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ZNF883P0CG24 379 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ST6GAL1P15907 406 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 FPR1P21462 350 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ELK4P28324 431 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 TIA1P31483 386 aaKnown RBP eCLIP11.08□□□□□ -0.64
VRK3-223ENST00000601341 DNAJA1P31689 397 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 RPL3P39023 403 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 ARFIP1P53367 373 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 TPD52P55327 224 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 WNT3P56703 355 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 STXBP1P61764 594 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 CSNK2BP67870 215 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 RAE1P78406 368 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 RGS1Q08116 209 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 UGT8Q16880 541 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ADPRMQ3LIE5 342 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ZIK1Q3SY52 487 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 NKAIN2Q5VXU1 208 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 KDM4DQ6B0I6 523 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 CBLL1Q75N03 491 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 RNF44Q7L0R7 432 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 EIF3MQ7L2H7 374 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 PAGE2Q7Z2X7 111 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ASPGQ86U10 573 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PLXDC1Q8IUK5 500 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 Q8N9G6 341 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 SRFBP1Q8NEF9 429 aaKnown RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 CLHC1Q8NHS4 586 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 NAT6Q93015 286 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 BORCS5Q969J3 196 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 QRFPRQ96P65 431 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 EBPLQ9BY08 206 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 ASPSCR1Q9BZE9 553 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 KLHL25Q9H0H3 589 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 SOX17Q9H6I2 414 aaPredicted RBP11.08□□□□□ -0.64
VRK3-223ENST00000601341 TBCCD1Q9NVR7 557 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 PSME2Q9UL46 239 aa11.08□□□□□ -0.64
VRK3-223ENST00000601341 VPS13AQ96RL7 3174 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 A0A0J9YVX5 310 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 CPED1A4D0V7 1026 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 SLC9B1P1A6NJY1 282 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 RNASET2O00584 256 aaKnown RBP11.07□□□□□ -0.64
VRK3-223ENST00000601341 PLPP1O14494 284 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 SCAMP2O15127 329 aaKnown RBP11.07□□□□□ -0.64
VRK3-223ENST00000601341 B4GAT1O43505 415 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 HS6ST1O60243 411 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 MYF5P13349 255 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 IGFBP5P24593 272 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 KDELR2P33947 212 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 CD47Q08722 323 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 NFATC3Q12968 1075 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 MOGQ16653 247 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 AMZ1Q400G9 498 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 OR4F3Q6IEY1 312 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 TCEAL6Q6IPX3 200 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 FAM92BQ6ZTR7 304 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 VN1R4Q7Z5H5 301 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 ZZZ3Q8IYH5 903 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 CARFQ8N187 725 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 ZNF655Q8N720 491 aaPredicted RBP11.07□□□□□ -0.64
VRK3-223ENST00000601341 C19orf47Q8N9M1 422 aaKnown RBP11.07□□□□□ -0.64
VRK3-223ENST00000601341 CAMKVQ8NCB2 501 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 WDR48Q8TAF3 677 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 FNDC8Q8TC99 324 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 TCEAL3Q969E4 200 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 MUL1Q969V5 352 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 RERGQ96A58 199 aaPredicted RBP11.07□□□□□ -0.64
VRK3-223ENST00000601341 CCDC74AQ96AQ1 378 aa11.07□□□□□ -0.64
VRK3-223ENST00000601341 COQ8BQ96D53 544 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms