RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CKMT1AP12532 417 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 NELFEP18615 380 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 CCL7P80098 99 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 RBBP4Q09028 425 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 PROX2Q3B8N5 592 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 COX20Q5RI15 118 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM64Q6YI46 380 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 RNF130Q86XS8 419 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM126BQ8IUX1 230 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 PAPD5Q8NDF8 572 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 OR5T3Q8NGG3 340 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 NETO1Q8TDF5 533 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 TANKQ92844 425 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 NCLNQ969V3 563 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 LRRN3Q9H3W5 708 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 ZNF768Q9H5H4 540 aaKnown RBP16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 AURKCQ9UQB9 309 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 MAP4K5Q9Y4K4 846 aa16.64■□□□□ 0.25
SHKBP1-224ENST00000600718 A0A0A6YYC8 382 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 DPPA5A6NC42 116 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 ENO4A6NNW6 628 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 A8MU76 341 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 I3L1I5 382 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 CHST10O43529 356 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 RDH16O75452 317 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 ETFAP13804 333 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 XKP51811 444 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 SIM1P81133 766 aaPredicted RBP16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 KCNAB1Q14722 419 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 FAM214AQ32MH5 1076 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 ZNF750Q32MQ0 723 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 TBCELQ5QJ74 424 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 GCNT6Q5T4J0 391 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 C6orf120Q7Z4R8 191 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 C11orf65Q8NCR3 313 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 SFXN5Q8TD22 340 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 MOAP1Q96BY2 351 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 PKP2Q99959 881 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 UGT2B28Q9BY64 529 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM38AQ9H6F2 299 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 DCAF13Q9NV06 445 aaKnown RBP16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 OLAHQ9NV23 265 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 PDP2Q9P2J9 529 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 RAPGEFL1Q9UHV5 662 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 CLCA2Q9UQC9 943 aa16.63■□□□□ 0.25
SHKBP1-224ENST00000600718 ZDBF2Q9HCK1 2354 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 CASQ2O14958 399 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 MED26O95402 600 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 RPLP0P05388 317 aaKnown RBP16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 BMP2P12643 396 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 PCGF2P35227 344 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 AVPR1BP47901 424 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 PRIM2P49643 509 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 SHC2P98077 582 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 DAB2P98082 770 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 BHLHB9Q6PI77 547 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 EID3Q8N140 333 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 LRRC25Q8N386 305 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 OR4D9Q8NGE8 314 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 SMOC1Q9H4F8 434 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 RIMS3Q9UJD0 308 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 PCDHGB2Q9Y5G2 931 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 A0A1W2PQM1 296 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM150CB9EJG8 249 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 H3BMH7 237 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 OR2B3O76000 313 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 NUDT7P0C024 238 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 KDELR2P33947 212 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 MAGEA8P43361 318 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 DUSP2Q05923 314 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 GPR19Q15760 415 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 CLPPQ16740 277 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 PLA2G2CQ5R387 149 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 ZNF574Q6ZN55 896 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 LILRA2Q8N149 483 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 IFI44Q8TCB0 444 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 ADAMTS18Q8TE60 1221 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 DNAJC9Q8WXX5 260 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 TSC22D3Q99576 134 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 SERTAD3Q9UJW9 196 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 ATXN7L1Q9ULK2 861 aaPredicted RBP16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 R4GN57 208 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 ADAMTS9Q9P2N4 1935 aa16.62■□□□□ 0.25
SHKBP1-224ENST00000600718 BLACEA4D250 179 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 H0YIG0 161 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 GPR75O95800 540 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 ANKRD34CP0C6C1 535 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 RNH1P13489 461 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 FOLR1P15328 257 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 HOXB6P17509 224 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 C16orf72Q14CZ0 275 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 FAM98BQ52LJ0 330 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 TMEM121BQ9BXQ6 578 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 VCX3BQ9H321 246 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 C3orf14Q9HBI5 128 aa16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 GOLGA4Q13439 2230 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-224ENST00000600718 A0A1W2PS29 197 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 FAM86C2PA6NEL3 165 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 FAM227AF5H4B4 570 aa16.6■□□□□ 0.25
SHKBP1-224ENST00000600718 CASC3O15234 703 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms