RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 NHSL2Q5HYW2 709 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 PRAMEF20Q5VT98 475 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 TRIM40Q6P9F5 258 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 CLEC9AQ6UXN8 241 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 MAATS1Q7Z4T9 603 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 ADGRE4PQ86SQ3 457 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 ZC3HC1Q86WB0 502 aaKnown RBP5.6□□□□□ -1.51
VRK3-220ENST00000600259 LACC1Q8IV20 430 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 KRT78Q8N1N4 520 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 CIARTQ8N365 385 aaPredicted RBP5.6□□□□□ -1.51
VRK3-220ENST00000600259 NKAPQ8N5F7 415 aaKnown RBP5.6□□□□□ -1.51
VRK3-220ENST00000600259 ZNF441Q8N8Z8 693 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 SPC24Q8NBT2 197 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 BBOF1Q8ND07 529 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 TRIM58Q8NG06 486 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 OR10G3Q8NGC4 313 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 MBD3L2Q8NHZ7 208 aaPredicted RBP5.6□□□□□ -1.51
VRK3-220ENST00000600259 DOK4Q8TEW6 326 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 ZNF473Q8WTR7 871 aaKnown RBP5.6□□□□□ -1.51
VRK3-220ENST00000600259 ESAMQ96AP7 390 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 WDYHV1Q96HA8 205 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 FBXL20Q96IG2 436 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 NAT9Q9BTE0 207 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 TBCDQ9BTW9 1192 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 CAPS2Q9BXY5 557 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 MS4A8Q9BY19 250 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 LZTFL1Q9NQ48 299 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 MOCS1Q9NZB8 636 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 GPRC5BQ9NZH0 403 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 MTRF1LQ9UGC7 380 aaKnown RBP5.6□□□□□ -1.51
VRK3-220ENST00000600259 FETUBQ9UGM5 382 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 PTBP2Q9UKA9 531 aaKnown RBP5.6□□□□□ -1.51
VRK3-220ENST00000600259 EDARQ9UNE0 448 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 TEX264Q9Y6I9 313 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 KIAA1549Q9HCM3 1950 aa5.6□□□□□ -1.51
VRK3-220ENST00000600259 HIVEP2P31629 2446 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 ARID1AO14497 2285 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 MED12Q93074 2177 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 MXRA5Q9NR99 2828 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 NINQ8N4C6 2090 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 NCKAP5O14513 1909 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 A0A088AWK7 358 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 CLCA1A8K7I4 914 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 SIAH2O43255 324 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 LRATO95237 230 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 GOSR1O95249 250 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 IL18BPO95998 194 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 IL2RAP01589 272 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 BMP7P18075 431 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 ZNF10P21506 573 aaPredicted RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 HIST1H1TP22492 207 aaPredicted RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 CTSSP25774 331 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 ADSLP30566 484 aaPredicted RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 SLCO1A2P46721 670 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 FNTAP49354 379 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 CDK9P50750 372 aaKnown RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 AGFG1P52594 562 aaKnown RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 DCAF7P61962 342 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 KCNJ2P63252 427 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 FOXF2Q12947 444 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 BIKQ13323 160 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 KEAP1Q14145 624 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 RCN2Q14257 317 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 EBPQ15125 230 aaKnown RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 TBCCQ15814 346 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 FBXO48Q5FWF7 155 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 CDKL4Q5MAI5 379 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 HP1BP3Q5SSJ5 553 aaPredicted RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 DCST1Q5T197 706 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 DEPDC1Q5TB30 811 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 SHEQ5VZ18 495 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 C18orf63Q68DL7 685 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 BICRALQ6AI39 1079 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 MRM1Q6IN84 353 aaKnown RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 TMEM64Q6YI46 380 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 SYDE1Q6ZW31 735 aaPredicted RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 ADAMTSL2Q86TH1 951 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 KIF18BQ86Y91 864 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 LAS2Q8IYD9 372 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 C9orf106Q8NAJ2 232 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 GABPB2Q8TAK5 448 aaPredicted RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 SLC22A8Q8TCC7 542 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 SPPL2AQ8TCT8 520 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 ZPLD1Q8TCW7 415 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 CCT6BQ92526 530 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 UCN3Q969E3 161 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 PTCD3Q96EY7 689 aaKnown RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 PBKQ96KB5 322 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 COX4I2Q96KJ9 171 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 RUNDC3BQ96NL0 473 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 DACH2Q96NX9 599 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 GNRHR2Q96P88 292 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 KCNC2Q96PR1 638 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 EGFL8Q99944 293 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 G6PC3Q9BUM1 346 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 SORBS1Q9BX66 1292 aaKnown RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 ZNF717Q9BY31 904 aaPredicted RBP5.59□□□□□ -1.51
VRK3-220ENST00000600259 UGT2B28Q9BY64 529 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 ANGPTL4Q9BY76 406 aa5.59□□□□□ -1.51
VRK3-220ENST00000600259 DERL2Q9GZP9 239 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms