RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 EBPLQ9BY08 206 aa18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 MFRPQ9BY79 579 aa18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 RNF32Q9H0A6 362 aa18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 EPN3Q9H201 632 aa18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 KCNK13Q9HB14 408 aa18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 EML4Q9HC35 981 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 G3BP2Q9UN86 482 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 DLGAP4Q9Y2H0 992 aa18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 FIS1Q9Y3D6 152 aa18.17■□□□□ 0.5
SHKBP1-221ENST00000599833 C1orf226A1L170 272 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 CRCPO75575 148 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 LINC00032P0C843 101 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 ALOX15P16050 662 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 TACR1P25103 407 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 TLX1P31314 330 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 GALNSP34059 522 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 CASRP41180 1078 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 TAS2R50P59544 299 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 C19orf57Q0VDD7 668 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 BST1Q10588 318 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 SPRED3Q2MJR0 410 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 ACER2Q5QJU3 275 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 LGI4Q8N135 537 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 TMEM132CQ8N3T6 1108 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 CATSPER1Q8NEC5 780 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 OR1N1Q8NGS0 311 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 FAM76AQ8TAV0 307 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 AGR3Q8TD06 166 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 SLC2A12Q8TD20 617 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 HAS2Q92819 552 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 PNPLA2Q96AD5 504 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 METTL2AQ96IZ6 378 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 ARGLU1Q9NWB6 273 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 PLA2G3Q9NZ20 509 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 GIMAP2Q9UG22 337 aa18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 POLR3HQ9Y535 204 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-221ENST00000599833 FLNCQ14315 2725 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 GOLGA6L10A6NI86 522 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 EIF4E1BA6NMX2 242 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 C17orf105B2RV13 164 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 SLC28A1O00337 649 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 SNNO75324 88 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 WDPCPO95876 746 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 CT62P0C5K7 136 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 SLC35E2P0CK97 266 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 SLC1A6P48664 564 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 ST13P50502 369 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 MGAT2Q10469 447 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 BIKQ13323 160 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 CEBPEQ15744 281 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 RFTN2Q52LD8 501 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 SPDYAQ5MJ70 313 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 ZNF468Q5VIY5 522 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 FAM71E1Q6IPT2 247 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 NOXRED1Q6NXP6 359 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 ZNF227Q86WZ6 799 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 BEST3Q8N1M1 668 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 TEX19Q8NA77 164 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 DOK4Q8TEW6 326 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 DAZLQ92904 295 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 CNRIP1Q96F85 164 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 VMP1Q96GC9 406 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 DGAT2Q96PD7 388 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 WDR41Q9HAD4 459 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 LRTM1Q9HBL6 345 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 C1orf109Q9NX04 203 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 B3GNT3Q9Y2A9 372 aa18.15■□□□□ 0.5
SHKBP1-221ENST00000599833 TRBV11-1A0A0K0K1C0 115 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 A8MUI8 341 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 ZNF354AO60765 605 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 IFNA16P05015 189 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 ANXA4P09525 319 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 NEFHP12036 1026 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 S1PR1P21453 382 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 GRK2P25098 689 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 TNFSF10P50591 281 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 CLCN2P51788 898 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 MLF1P58340 268 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 ZNF763Q0D2J5 394 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 IMPG1Q17R60 797 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 IRAK1BP1Q5VVH5 260 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 FAM180BQ6P0A1 224 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 C16orf47Q6ZP98 133 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 OR4K14Q8NGD5 310 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 MGARPQ8TDB4 240 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 SREK1Q8WXA9 508 aaKnown RBP18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 SENP5Q96HI0 755 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 EGLN2Q96KS0 407 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 EPS8L2Q9H6S3 715 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 CXorf21Q9HAI6 301 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 MYNNQ9NPC7 610 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 LUZP4Q9P127 313 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 RAP2CQ9Y3L5 183 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 PCDHGA10Q9Y5H3 936 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 CLCA3PQ9Y6N3 262 aa18.14■□□□□ 0.49
SHKBP1-221ENST00000599833 RGS14O43566 566 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 F10P00742 488 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 CPMP14384 443 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 SDC1P18827 310 aa18.13■□□□□ 0.49
SHKBP1-221ENST00000599833 XKP51811 444 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms