RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 OR7G3Q8NG95 312 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 OR52N2Q8NGI0 321 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 OR5L2Q8NGL0 311 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 OR8K3Q8NH51 312 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 CENPKQ9BS16 269 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 DEPPQ9NTK1 212 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 ANGPTL3Q9Y5C1 460 aa17.37■□□□□ 0.37
PNKP-213ENST00000599543 ANKRD17O75179 2603 aaKnown RBP17.37■□□□□ 0.37
PNKP-213ENST00000599543 INTS1Q8N201 2190 aaKnown RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 CDH16O75309 829 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 RAP1GDS1P52306 607 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 ALDH18A1P54886 795 aaKnown RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 PPIAP62937 165 aaKnown RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 DDX39BQ13838 428 aaKnown RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 PAOXQ6QHF9 649 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 RTL4Q6ZR62 310 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 GK5Q6ZS86 529 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 TMEM151AQ8N4L1 468 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 MREGQ8N565 214 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 ZNF321PQ8N8H1 164 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 OR2M7Q8NG81 312 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 LURAP1Q96LR2 239 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 NSUN5Q96P11 429 aaKnown RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 MRPL57Q9BQC6 102 aaKnown RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 DEFB127Q9H1M4 99 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 MRPL46Q9H2W6 279 aaKnown RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 TP63Q9H3D4 680 aaPredicted RBP17.36■□□□□ 0.37
PNKP-213ENST00000599543 PLSCR2Q9NRY7 297 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 MS4A12Q9NXJ0 267 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 ADGRE2Q9UHX3 823 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 EMCNQ9ULC0 261 aa17.36■□□□□ 0.37
PNKP-213ENST00000599543 CELSR1Q9NYQ6 3014 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 FAM166BA8MTA8 275 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 DYRK3O43781 588 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 KLK8O60259 260 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 SMIM24O75264 130 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 TSPAN8P19075 237 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 PCDH1Q08174 1060 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 OR4C11Q6IEV9 310 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 RGS9BPQ6ZS82 235 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 SH2D5Q6ZV89 423 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 SLC22A16Q86VW1 577 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 HUS1BQ8NHY5 278 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 ACMSDQ8TDX5 336 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 ANKRD9Q96BM1 317 aaPredicted RBP17.35■□□□□ 0.37
PNKP-213ENST00000599543 DGAT2Q96PD7 388 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 OR51B5Q9H339 312 aa17.35■□□□□ 0.37
PNKP-213ENST00000599543 A0A0G2JMM0 328 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 A0A1W2PPB8 328 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 A0A1W2PRS3 328 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 PINLYPA6NC86 204 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 A8MT66 165 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 KIR3DP1A8MWS1 328 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 G3V3Y1 287 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 FGF17O60258 216 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 SSTR2P30874 369 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 PIK3CBP42338 1070 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 KIR3DL1P43629 444 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 STT3AP46977 705 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 PHEXP78562 749 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 SLAMF1Q13291 335 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 ZNF750Q32MQ0 723 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 DEPDC1Q5TB30 811 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 NDUFAF5Q5TEU4 345 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 TMEM211Q6ICI0 200 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 OPN5Q6U736 354 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 GOLGA7Q7Z5G4 137 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 OR4N5Q8IXE1 308 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 RNF175Q8N4F7 328 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 GOLM1Q8NBJ4 401 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 ZNF721Q8TF20 911 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 RGMAQ96B86 450 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 SGCZQ96LD1 299 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 FAM173AQ9BQD7 235 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 SORBS1Q9BX66 1292 aaKnown RBP17.34■□□□□ 0.37
PNKP-213ENST00000599543 TTTY12Q9BZ98 90 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 RPF2Q9H7B2 306 aaKnown RBP17.34■□□□□ 0.37
PNKP-213ENST00000599543 ACTR8Q9H981 624 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 PPCSQ9HAB8 311 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 DMRT3Q9NQL9 472 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 PHF11Q9UIL8 331 aa17.34■□□□□ 0.37
PNKP-213ENST00000599543 HCFC1P51610 2035 aa17.33■□□□□ 0.37
PNKP-213ENST00000599543 CCDC189A1A4V9 331 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 DLX3O60479 287 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 SPAG7O75391 227 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 ETHE1O95571 254 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 KRT4P19013 534 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 TLX1P31314 330 aaPredicted RBP17.33■□□□□ 0.36
PNKP-213ENST00000599543 IGLV3-21P80748 117 aaPredicted RBP17.33■□□□□ 0.36
PNKP-213ENST00000599543 PLIN5Q00G26 463 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 ZNF844Q08AG5 666 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 GTF2H2Q13888 395 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 PCBP2Q15366 365 aaKnown RBP eCLIP17.33■□□□□ 0.36
PNKP-213ENST00000599543 KRT71Q3SY84 523 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 GTF2H2CQ6P1K8 395 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 FAM47EQ6ZV65 393 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 ZNF295-AS1Q8N0V1 137 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 MARVELD2Q8N4S9 558 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 CHTF18Q8WVB6 975 aa17.33■□□□□ 0.36
PNKP-213ENST00000599543 REPS1Q96D71 796 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms