RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 TRPM8Q7Z2W7 1104 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 R3HCC1LQ7Z5L2 792 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 PDSS2Q86YH6 399 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 AMER3Q8N944 861 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 GLB1L3Q8NCI6 653 aaPredicted RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 GFM2Q969S9 779 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 TAAR9Q96RI9 348 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 MAPKAP1Q9BPZ7 522 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 DDA1Q9BW61 102 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 ULBP3Q9BZM4 244 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 ZNF304Q9HCX3 659 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 TMEM45AQ9NWC5 275 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 CCDC167Q9P0B6 97 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 HCN3Q9P1Z3 774 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 DAPP1Q9UN19 280 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 MRPS33Q9Y291 106 aaKnown RBP11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 MAP4K5Q9Y4K4 846 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 PCSK5Q92824 1860 aa11.35□□□□□ -0.59
SHKBP1-213ENST00000597325 FAM234BA2RU67 622 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 NR5A2O00482 541 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 EBAG9O00559 213 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 KIAA0754O94854 1291 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 TIAF1O95411 115 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 AIFM1O95831 613 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 ATXN8OSP0DMR3 200 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 PIM1P11309 404 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 DRD2P14416 443 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 AGXTP21549 392 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 PIK3R1P27986 724 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 GCGRP47871 477 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 POLR2JP52435 117 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 HNRNPH2P55795 449 aaKnown RBP11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 RAB38P57729 211 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 C21orf58P58505 322 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 ABHD18Q0P651 414 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 RUNX2Q13950 521 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 DSG2Q14126 1118 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 FAM71E1Q6IPT2 247 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 CA13Q8N1Q1 262 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 FITM2Q8N6M3 262 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 FAM47BQ8NA70 645 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 OR5T3Q8NGG3 340 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 OR9I1Q8NGQ6 314 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 PMEPA1Q969W9 287 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 PPCDCQ96CD2 204 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 TM4SF18Q96CE8 201 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 MTERF3Q96E29 417 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 EGLN2Q96KS0 407 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 CCDC106Q9BWC9 280 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 YIPF2Q9BWQ6 316 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 REEP4Q9H6H4 257 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 ATAD3AQ9NVI7 634 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 TEX10Q9NXF1 929 aaPredicted RBP11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 ASB4Q9Y574 426 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 MAU2Q9Y6X3 613 aa11.34□□□□□ -0.59
SHKBP1-213ENST00000597325 C1orf226A1L170 272 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 DYTNA2CJ06 578 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 CCDC154A6NI56 674 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 CCT8L1PA6NM43 557 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 ANKRD28O15084 1053 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 CHST10O43529 356 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 KLK3P07288 261 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 FURINP09958 794 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 PRKAR1AP10644 381 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 DDCP20711 480 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 S100A3P33764 101 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 OR1D4P47884 311 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 SNRPNP63162 240 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 DCDP81605 110 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 ACTN3Q08043 901 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 MRPL49Q13405 166 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 TESK1Q15569 626 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 DEFB109BQ30KR1 87 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 PGS1Q32NB8 556 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 FAM174BQ3ZCQ3 159 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 CPTPQ5TA50 214 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 FAM91A1Q658Y4 838 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 OR52E8Q6IFG1 317 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 RIPOR1Q6ZS17 1223 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 GK5Q6ZS86 529 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 SNX32Q86XE0 403 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 DTWD1Q8N5C7 304 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 KRTCAP2Q8N6L1 136 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 TESCQ96BS2 214 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 CMTM5Q96DZ9 223 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 RNF31Q96EP0 1072 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 DPH2Q9BQC3 489 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 SLC25A23Q9BV35 468 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 RBCK1Q9BYM8 510 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 ACTL8Q9H568 366 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 GIMAP4Q9NUV9 329 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 EHD3Q9NZN3 535 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 SH3BP4Q9P0V3 963 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 TRPC4Q9UBN4 977 aa11.33□□□□□ -0.6
SHKBP1-213ENST00000597325 ATG4BQ9Y4P1 393 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms