RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-215	ENST00000596351	OPN5	Q6U736	354 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	SYT10	Q6XYQ8	523 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	GPR180	Q86V85	440 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	FAM109A	Q8N4B1	249 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	GOLM1	Q8NBJ4	401 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	OR5L2	Q8NGL0	311 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	CHTF18	Q8WVB6	975 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	ANP32B	Q92688	251 aa	Known RBP	11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	RND1	Q92730	232 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	RGMA	Q96B86	450 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	C14orf79	Q96F83	325 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	SENP5	Q96HI0	755 aa	Predicted RBP	11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	GAL3ST4	Q96RP7	486 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	SMC6	Q96SB8	1091 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	RPF2	Q9H7B2	306 aa	Known RBP	11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	ACTR8	Q9H981	624 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	IL1RL2	Q9HB29	575 aa		11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351	CPSF2	Q9P2I0	782 aa	Known RBP	11.16	□□□□□ -0.62
LTBP4-215	ENST00000596351		A0A087X1B8	175 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351		A0A1W2PS29	197 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	SYCE1L	A8MT33	242 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	IGHG3	P01860	377 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	GBA	P04062	536 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351		P04436	131 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ALOX15	P16050	662 aa	Predicted RBP	11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	IGFBP2	P18065	325 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	CHRNB4	P30926	498 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	PIK3CB	P42338	1070 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	NEK2	P51955	445 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	HERVK_113	P63132	956 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ERVK-8	P63133	956 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	PLIN5	Q00G26	463 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	TFF3	Q07654	80 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ZNF267	Q14586	743 aa	Predicted RBP	11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	MPEG1	Q2M385	716 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ZNF791	Q3KP31	576 aa	Predicted RBP	11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	PIGG	Q5H8A4	983 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	NDUFAF5	Q5TEU4	345 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	FAM219B	Q5XKK7	198 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	TMEM211	Q6ICI0	200 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	LYPD8	Q6UX82	237 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	TRIL	Q7L0X0	811 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	GOLGA7	Q7Z5G4	137 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ZCCHC7	Q8N3Z6	543 aa	Known RBP	11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	LILRB4	Q8NHJ6	448 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	RHEBL1	Q8TAI7	183 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	NUBPL	Q8TB37	319 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ASB5	Q8WWX0	329 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	FBXL20	Q96IG2	436 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	SGCZ	Q96LD1	299 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	TREX2	Q9BQ50	279 aa	Predicted RBP	11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ERVK-6	Q9BXR3	956 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ZNF358	Q9NW07	568 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	PHF11	Q9UIL8	331 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	ERVK-19	Q9WJR5	959 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	RNF11	Q9Y3C5	154 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	FAM215A	Q9Y5M1	114 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	KIAA1549	Q9HCM3	1950 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351	NF1	P21359	2839 aa		11.15	□□□□□ -0.62
LTBP4-215	ENST00000596351		A0A096LPK6	155 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351		A0A0A6YYD5	115 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351		A0A1W2PR48	441 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	PROM1	O43490	865 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	KLK8	O60259	260 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	TOX	O94900	526 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	KLHL2	O95198	593 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	AIFM1	O95831	613 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	ALDOA	P04075	364 aa	Known RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	CLPS	P04118	112 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	NR2F6	P10588	404 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	ENDOU	P21128	410 aa	Known RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	ACVR2A	P27037	513 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	BSG	P35613	385 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	BUD31	P41223	144 aa	Predicted RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	ALDH18A1	P54886	795 aa	Known RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	ETF1	P62495	437 aa	Known RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	KCNJ2	P63252	427 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	GTF2H2	Q13888	395 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	FAM83E	Q2M2I3	478 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	LIPJ	Q5W064	366 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	RTL6	Q6ICC9	239 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	MRM1	Q6IN84	353 aa	Known RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	GTF2H2C	Q6P1K8	395 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	TMEM64	Q6YI46	380 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	RGS9BP	Q6ZS82	235 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	CDH24	Q86UP0	819 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	PLD6	Q8N2A8	252 aa	Known RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	FAM13C	Q8NE31	585 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	OR10Q1	Q8NGQ4	319 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	SLC22A8	Q8TCC7	542 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	TANK	Q92844	425 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	SPACA9	Q96E40	222 aa	Predicted RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	RBM18	Q96H35	190 aa	Known RBP	11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	GPR78	Q96P69	363 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	CDK15	Q96Q40	435 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	CENPK	Q9BS16	269 aa		11.14	□□□□□ -0.63
LTBP4-215	ENST00000596351	VPS11	Q9H270	941 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms