RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 ZSCAN1Q8NBB4 408 aa21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 EXOSC8Q96B26 276 aaKnown RBP21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 KLHL29Q96CT2 875 aa21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 ZNF764Q96H86 408 aaPredicted RBP21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 TEX37Q96LM6 180 aa21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 IP6K3Q96PC2 410 aa21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 SLC35C2Q9NQQ7 365 aa21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 C19orf25Q9UFG5 118 aaPredicted RBP21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 G3BP2Q9UN86 482 aaKnown RBP21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 MGAQ8IWI9 3026 aa21.11■□□□□ 0.97
SNRNP70-204ENST00000595231 PTPRQQ9UMZ3 2332 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 SCAMP2O15127 329 aaKnown RBP21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 IDO1P14902 403 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 ARFIP2P53365 341 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 UCNP55089 124 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 OR4D2P58180 307 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 EEF1A2Q05639 463 aaKnown RBP21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 DUSP2Q05923 314 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 BIKQ13323 160 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 PCOLCEQ15113 449 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 CEBPEQ15744 281 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 GSTA3Q16772 222 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 ZNF385BQ569K4 471 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 THAP4Q8WY91 577 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 MTERF3Q96E29 417 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 RILPQ96NA2 401 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 ZNF700Q9H0M5 742 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 SDR39U1Q9NRG7 319 aaPredicted RBP21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 ATP6V1HQ9UI12 483 aa21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 MAP1BP46821 2468 aaKnown RBP21.1■□□□□ 0.97
SNRNP70-204ENST00000595231 SRRM3A6NNA2 597 aaPredicted RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 SHOX2O60902 331 aaPredicted RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 SLC35E2P0CK97 266 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 FEN1P39748 380 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 TMPRSS3P57727 454 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 UFM1P61960 85 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 MPEG1Q2M385 716 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 CPZQ66K79 652 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 DGAT2L6Q6ZPD8 337 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 ST13P4Q8IZP2 240 aaPredicted RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 FAM9CQ8IZT9 166 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 C7orf57Q8NEG2 295 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 OR7A2PQ8NGA2 310 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 C10orf82Q8WW14 230 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 PPWD1Q96BP3 646 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 CATSPER2Q96P56 530 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 ELAC2Q9BQ52 826 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 PNO1Q9NRX1 252 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 SYNDIG1LA6NDD5 238 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 CPMP14384 443 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 PCSK2P16519 638 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 STT3AP46977 705 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 VAC14Q08AM6 782 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 PTPMT1Q8WUK0 201 aaPredicted RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 SNRNP27Q8WVK2 155 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 PPCDCQ96CD2 204 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 RBM18Q96H35 190 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 IMMP1LQ96LU5 166 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 DPY30Q9C005 99 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 FAM107BQ9H098 131 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 SH3BP4Q9P0V3 963 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 FBXL4Q9UKA2 621 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 ZNF780BQ9Y6R6 833 aa21.09■□□□□ 0.97
SNRNP70-204ENST00000595231 DSPP15924 2871 aaKnown RBP21.08■□□□□ 0.97
SNRNP70-204ENST00000595231 A8MUA0 341 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 MASP2O00187 686 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 IFNA16P05015 189 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 PORP16435 677 aaPredicted RBP21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 CSNK2A2P19784 350 aaPredicted RBP21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 HPCAL1P37235 193 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 NME5P56597 212 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 ELAVL1Q15717 326 aaKnown RBP21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 PDCD4Q53EL6 469 aaKnown RBP21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 METTL21CQ5VZV1 264 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 NDUFAF7Q7L592 441 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 R3HCC1LQ7Z5L2 792 aaKnown RBP21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 CPLX4Q7Z7G2 160 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 SUN3Q8TAQ9 357 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 COQ8BQ96D53 544 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 EPN3Q9H201 632 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 ADAP2Q9NPF8 381 aa21.08■□□□□ 0.96
SNRNP70-204ENST00000595231 MYO1GB0I1T2 1018 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 PEX12O00623 359 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 SEC24DO94855 1032 aaPredicted RBP21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 LAMP1P11279 417 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 IL12AP29459 219 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 RPL3P39023 403 aaKnown RBP21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 MRPL19P49406 292 aaKnown RBP21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 RPS6KA2Q15349 733 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 PAPD4Q6PIY7 484 aaKnown RBP21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 SPATA21Q7Z572 469 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 CAMKMTQ7Z624 323 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 NFAM1Q8NET5 270 aaPredicted RBP21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 DGAT2Q96PD7 388 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 RABEP2Q9H5N1 569 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 SLAMF7Q9NQ25 335 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 POLHQ9Y253 713 aa21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 COPG1Q9Y678 874 aaKnown RBP21.07■□□□□ 0.96
SNRNP70-204ENST00000595231 SNX3O60493 162 aa21.06■□□□□ 0.96
SNRNP70-204ENST00000595231 ATP1B1P05026 303 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms