RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SERTAD3Q9UJW9 196 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 PACSIN3Q9UKS6 424 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 VPS4AQ9UN37 437 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 SCN3AQ9NY46 2000 aa12.7□□□□□ -0.38
VMP1-217ENST00000593168 A8MUI8 341 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 MYO1GB0I1T2 1018 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 TMEM150CB9EJG8 249 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 H0YIG0 161 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 PGRMC2O15173 223 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 PDPK1O15530 556 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 FOXS1O43638 330 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 MGRN1O60291 552 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 OR2B3O76000 313 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 SORBS2O94875 1100 aaKnown RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 C6orf47O95873 294 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 FOLR1P15328 257 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 PPIBP23284 216 aaKnown RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 GCGRP47871 477 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 HBA1P69905 142 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 INSM1Q01101 510 aaPredicted RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 ACY1Q03154 408 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 LIPEQ05469 1076 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 TRAP1Q12931 704 aaKnown RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 TRA2AQ13595 282 aaKnown RBP eCLIP12.69□□□□□ -0.38
VMP1-217ENST00000593168 CEBPEQ15744 281 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 GTDC1Q4AE62 458 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 GLIPR1L2Q4G1C9 344 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 RABL3Q5HYI8 236 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 CYB5D1Q6P9G0 228 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 DNAJC14Q6Y2X3 702 aaPredicted RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 PRSS41Q7RTY9 318 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 GPR135Q8IZ08 494 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 SAMD14Q8IZD0 417 aaPredicted RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 CA13Q8N1Q1 262 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 TRIML2Q8N7C3 387 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 RNF148Q8N7C7 305 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 OR4A15Q8NGL6 344 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 EXOSC8Q96B26 276 aaKnown RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 ZNF501Q96CX3 271 aaPredicted RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 ASB9Q96DX5 294 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 MVB12AQ96EY5 273 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 GFM1Q96RP9 751 aaKnown RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 CPPED1Q9BRF8 314 aaPredicted RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 THUMPD3Q9BV44 507 aaKnown RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 FANCEQ9HB96 536 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 SLC6A13Q9NSD5 602 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 GIMAP4Q9NUV9 329 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 IRAK4Q9NWZ3 460 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 UTS2RQ9UKP6 389 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 CLCA2Q9UQC9 943 aa12.69□□□□□ -0.38
VMP1-217ENST00000593168 NUP214P35658 2090 aaPredicted RBP12.69□□□□□ -0.38
VMP1-217ENST00000593168 BLACEA4D250 179 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ZNF860A6NHJ4 632 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 EVPLLA8MZ36 301 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 J3QKU1 62 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 SGK494L7N484 410 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 CLIC1O00299 241 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 CYR61O00622 381 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ACOT8O14734 319 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 NVLO15381 856 aaKnown RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 DNAJB6O75190 326 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 BCAS2O75934 225 aaPredicted RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 MED26O95402 600 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 EFNA1P20827 205 aaPredicted RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 HTR1EP28566 365 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 AVPR1BP47901 424 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 GSK3BP49841 420 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ARSFP54793 590 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 MANFP55145 182 aaKnown RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 ITGA1P56199 1179 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 RAB38P57729 211 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 MTPNP58546 118 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 MS4A2Q01362 244 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 BNIP2Q12982 314 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ILKQ13418 452 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 SELPLGQ14242 412 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 KPNB1Q14974 876 aaKnown RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 GPR19Q15760 415 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 FXNQ16595 210 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 TBC1D25Q3MII6 688 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 OR52E8Q6IFG1 317 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 SLITRK4Q8IW52 837 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 C10orf67Q8IYJ2 551 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 CACTIN-AS1Q8N1I8 211 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 OR9A4Q8NGU2 314 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 OR1L3Q8NH93 324 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ZFP28Q8NHY6 868 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 PSMA8Q8TAA3 256 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ADAMTS18Q8TE60 1221 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ZFP90Q8TF47 636 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 CCDC124Q96CT7 223 aaKnown RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 CNRIP1Q96F85 164 aaPredicted RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 CCDC74BQ96LY2 380 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ECSITQ9BQ95 431 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 MUC13Q9H3R2 512 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 ALG2Q9H553 416 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 RPF2Q9H7B2 306 aaKnown RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 KAT8Q9H7Z6 458 aaKnown RBP12.68□□□□□ -0.38
VMP1-217ENST00000593168 TPT1P8Q9HAU6 139 aa12.68□□□□□ -0.38
VMP1-217ENST00000593168 NEUROD4Q9HD90 331 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms