RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 ZNF750Q32MQ0 723 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 MRM1Q6IN84 353 aaKnown RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 SLC29A4Q7RTT9 530 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 C9orf40Q8IXQ3 194 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 FBXW8Q8N3Y1 598 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 TMEM251Q8N6I4 163 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 WDR20Q8TBZ3 569 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 PAQR8Q8TEZ7 354 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 ISL2Q96A47 359 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 SPACA9Q96E40 222 aaPredicted RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 SENP5Q96HI0 755 aaPredicted RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 SMC6Q96SB8 1091 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 MTERF1Q99551 399 aaKnown RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 ZNF717Q9BY31 904 aaPredicted RBP12.27□□□□□ -0.45
APOC1-209ENST00000592885 FUT8Q9BYC5 575 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 TSPYL1Q9H0U9 437 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 DEFB127Q9H1M4 99 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 ACSS3Q9H6R3 686 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 WDR41Q9HAD4 459 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 SH2D2AQ9NP31 389 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 ATG4BQ9Y4P1 393 aa12.27□□□□□ -0.45
APOC1-209ENST00000592885 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.27□□□□□ -0.454e-6■□□□□ 11
APOC1-209ENST00000592885 ZNF407Q9C0G0 2248 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 PROM1O43490 865 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 OR10H2O60403 315 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 HCN1O60741 890 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 WDR1O75083 606 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 SH3BGRLO75368 114 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 PDE9AO76083 593 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 NADKO95544 446 aaPredicted RBP12.26□□□□□ -0.45
APOC1-209ENST00000592885 GPR75O95800 540 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 ALDOAP04075 364 aaKnown RBP12.26□□□□□ -0.45
APOC1-209ENST00000592885 CCL3P10147 92 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 IGFBP2P18065 325 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 TYK2P29597 1187 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 BSGP35613 385 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 ASPHQ12797 758 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 TRADDQ15628 312 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 ZNF791Q3KP31 576 aaPredicted RBP12.26□□□□□ -0.45
APOC1-209ENST00000592885 TECRLQ5HYJ1 363 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 EMC4Q5J8M3 183 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 SLC22A10Q63ZE4 541 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 C18orf63Q68DL7 685 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 CYP20A1Q6UW02 462 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 MEX3BQ6ZN04 569 aaKnown RBP12.26□□□□□ -0.45
APOC1-209ENST00000592885 RNF111Q6ZNA4 994 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 TRILQ7L0X0 811 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 TAOK1Q7L7X3 1001 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 GOLGA7Q7Z5G4 137 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 OR4N5Q8IXE1 308 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 OR5M3Q8NGP4 307 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 LILRB4Q8NHJ6 448 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 GPR78Q96P69 363 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 SERPINI1Q99574 410 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 SORBS1Q9BX66 1292 aaKnown RBP12.26□□□□□ -0.45
APOC1-209ENST00000592885 IPPKQ9H8X2 491 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 SLC24A3Q9HC58 644 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 MCCC2Q9HCC0 563 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 QPCTLQ9NXS2 382 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 CNIH4Q9P003 139 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 MTRF1LQ9UGC7 380 aaKnown RBP12.26□□□□□ -0.45
APOC1-209ENST00000592885 BOKQ9UMX3 212 aaPredicted RBP12.26□□□□□ -0.45
APOC1-209ENST00000592885 RNF6Q9Y252 685 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 ASB4Q9Y574 426 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 HRH3Q9Y5N1 445 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 HCFC1P51610 2035 aa12.26□□□□□ -0.45
APOC1-209ENST00000592885 OTOGQ6ZRI0 2925 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 EML6Q6ZMW3 1958 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 IQANK1A0A1B0GTG1 560 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 ESYT3A0FGR9 886 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 FAM47E-STBD1D6RA91 191 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 NPIPA2E9PIF3 369 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 NPIPA3F8WFD2 350 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 STX16-NPEPL1H3BU86 382 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 STX16O14662 325 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 ZNF354AO60765 605 aaPredicted RBP12.25□□□□□ -0.45
APOC1-209ENST00000592885 CLDN9O95484 217 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 HOXD4P09016 255 aaPredicted RBP12.25□□□□□ -0.45
APOC1-209ENST00000592885 RBP1P09455 135 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 FBXO45P0C2W1 286 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 FAM58BPP0C7Q3 252 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 SLC35E2P0CK97 266 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 ACVR2AP27037 513 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 MSX1P28360 303 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 SERPINB3P29508 390 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 MAGEA5P43359 124 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 MAGEA12P43365 314 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 DNASE1L1P49184 302 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 MAN2A2P49641 1150 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 SERPINB9P50453 376 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 SLC37A1P57057 533 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 HERVK_113P63132 956 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 ERVK-8P63133 956 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 EBPQ15125 230 aaKnown RBP12.25□□□□□ -0.45
APOC1-209ENST00000592885 UAP1Q16222 522 aaPredicted RBP12.25□□□□□ -0.45
APOC1-209ENST00000592885 CPSF6Q16630 551 aaKnown RBP eCLIP12.25□□□□□ -0.45
APOC1-209ENST00000592885 TSNAXIP1Q2TAA8 658 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 GXYLT1Q4G148 440 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 TBCELQ5QJ74 424 aa12.25□□□□□ -0.45
APOC1-209ENST00000592885 OR52E8Q6IFG1 317 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms