RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 RASAL1O95294 804 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 CBX6O95503 412 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 CHN1P15882 459 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 ALOX15P16050 662 aaPredicted RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 CREB1P16220 341 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 TRHRP34981 398 aaPredicted RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 CYB561P49447 251 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 HLCSP50747 726 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 FOXA1P55317 472 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 ZNF844Q08AG5 666 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 MRPL49Q13405 166 aaKnown RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 PCLAFQ15004 111 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 NR6A1Q15406 480 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 INAQ16352 499 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 KRT71Q3SY84 523 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 OR52E8Q6IFG1 317 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 SCIMPQ6UWF3 145 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 DGAT2L6Q6ZPD8 337 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 ST13P4Q8IZP2 240 aaPredicted RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 BCORP1Q8N888 145 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 ZNF321PQ8N8H1 164 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 OR4K14Q8NGD5 310 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 ZNF721Q8TF20 911 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 SENP5Q96HI0 755 aaPredicted RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 FAM111AQ96PZ2 611 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 TAAR6Q96RI8 345 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 PELOQ9BRX2 385 aaKnown RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 SHCBP1LQ9BZQ2 653 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 TRIM45Q9H8W5 580 aaPredicted RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 LIN28AQ9H9Z2 209 aaKnown RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 TNFRSF12AQ9NP84 129 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 KLHL1Q9NR64 748 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 LRFN1Q9P244 771 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 SLC17A7Q9P2U7 560 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 MYOTQ9UBF9 498 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 COPS7AQ9UBW8 275 aa8.55□□□□□ -1.04
DNMT1-223ENST00000591239 YARS2Q9Y2Z4 477 aaKnown RBP8.55□□□□□ -1.04
DNMT1-223ENST00000591239 A0A1W2PS29 197 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ANKUB1A6NFN9 424 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 HRKO00198 91 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 RGS16O15492 202 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 CRCPO75575 148 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SLC25A12O75746 678 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 OR2J2O76002 312 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 IGKV3-11P04433 115 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SLC35E2P0CK97 266 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 UROSP10746 265 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 CD46P15529 392 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 PIK3R1P27986 724 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SERPINB3P29508 390 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ALDH3A1P30838 453 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 GALNSP34059 522 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SSR4P51571 173 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 XKP51811 444 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 TRA2BP62995 288 aaKnown RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 RNF4P78317 190 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 HMGCS1Q01581 520 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ACSM2AQ08AH3 577 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ASPHQ12797 758 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 MAPKAPK3Q16644 382 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 EIF2S3LQ2VIR3 472 aaKnown RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SPIN4Q56A73 249 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SPDYAQ5MJ70 313 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ACSM2BQ68CK6 577 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ZNF324BQ6AW86 544 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 C16orf47Q6ZP98 133 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 MMP21Q8N119 569 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 TMEM156Q8N614 296 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 OR5L2Q8NGL0 311 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 OR8K3Q8NH51 312 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 DNAJB8Q8NHS0 232 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 TCP10LQ8TDR4 215 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SREK1Q8WXA9 508 aaKnown RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 RIT1Q92963 219 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 TMEM125Q96AQ2 219 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 TM4SF18Q96CE8 201 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 C11orf24Q96F05 449 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 APIPQ96GX9 242 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 FBXL20Q96IG2 436 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ART5Q96L15 291 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 C5orf34Q96MH7 638 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 TRMOQ9BU70 441 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 MECRQ9BV79 373 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 GATA5Q9BWX5 397 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 HES7Q9BYE0 225 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 OLAHQ9NV23 265 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SENP1Q9P0U3 644 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 MCM8Q9UJA3 840 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 CES1P1Q9UKY3 287 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 PCDHA9Q9Y5H5 950 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 FLNBO75369 2602 aaKnown RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 LRRK2Q5S007 2527 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 ESPL1Q14674 2120 aa8.54□□□□□ -1.04
DNMT1-223ENST00000591239 USP9XQ93008 2570 aaPredicted RBP8.54□□□□□ -1.04
DNMT1-223ENST00000591239 SETXQ7Z333 2677 aaKnown RBP8.53□□□□□ -1.04
DNMT1-223ENST00000591239 GNG14A0A1W2PPG7 69 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 C1orf226A1L170 272 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 CLEC18AA5D8T8 446 aa8.53□□□□□ -1.04
DNMT1-223ENST00000591239 WWP2O00308 870 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms