RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 WDR60Q8WVS4 1066 aa20.97■□□□□ 0.95
ATG4D-209ENST00000588857 ASB9Q96DX5 294 aa20.97■□□□□ 0.95
ATG4D-209ENST00000588857 SLC35A5Q9BS91 424 aa20.97■□□□□ 0.95
ATG4D-209ENST00000588857 IKZF5Q9H5V7 419 aa20.97■□□□□ 0.95
ATG4D-209ENST00000588857 TPT1P8Q9HAU6 139 aa20.97■□□□□ 0.95
ATG4D-209ENST00000588857 CORO2BQ9UQ03 480 aa20.97■□□□□ 0.95
ATG4D-209ENST00000588857 SEC16AO15027 2179 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 BLACEA4D250 179 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 RFPL3O75679 317 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 UQCRC2P22695 453 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 XKP51811 444 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 MAT1AQ00266 395 aaKnown RBP20.96■□□□□ 0.95
ATG4D-209ENST00000588857 C16orf72Q14CZ0 275 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 BPHLQ86WA6 291 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-209ENST00000588857 CCDC116Q8IYX3 515 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 OR10A6Q8NH74 314 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 PEX11GQ96HA9 241 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 GLIPR2Q9H4G4 154 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 MAU2Q9Y6X3 613 aa20.96■□□□□ 0.95
ATG4D-209ENST00000588857 A0A1B0GX78 115 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 EFCAB7A8K855 629 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 STAMBPO95630 424 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 CHI3L1P36222 383 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-209ENST00000588857 BNIP2Q12982 314 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 CEBPEQ15744 281 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 ZNF750Q32MQ0 723 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 SPDYE7PQ495Y7 208 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 PPP1R3BQ86XI6 285 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 TMEM126BQ8IUX1 230 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 OR51Q1Q8NH59 317 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 ZFP90Q8TF47 636 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 COL26A1Q96A83 441 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 ZNF681Q96N22 645 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 YIPF2Q9BWQ6 316 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 PIF1Q9H611 641 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 CXorf36Q9H7Y0 433 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 KAT8Q9H7Z6 458 aaKnown RBP20.95■□□□□ 0.94
ATG4D-209ENST00000588857 SEMA3GQ9NS98 782 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 OCIAD1Q9NX40 245 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 AKAP7Q9P0M2 348 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-209ENST00000588857 BCAP29Q9UHQ4 241 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 COL27A1Q8IZC6 1860 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-209ENST00000588857 NCOR2Q9Y618 2525 aa20.95■□□□□ 0.94
ATG4D-209ENST00000588857 NTRK1P04629 796 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 ADRB1P08588 477 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 PPP2R1BP30154 601 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 OR1D4P47884 311 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 FOLH1Q04609 750 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 FLOT2Q14254 428 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 IL11RAQ14626 422 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 SYT16Q17RD7 645 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 ANGPTL8Q6UXH0 198 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 OR4N5Q8IXE1 308 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 CLEC4FQ8N1N0 589 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 LRRC25Q8N386 305 aaPredicted RBP20.94■□□□□ 0.94
ATG4D-209ENST00000588857 TMEM52Q8NDY8 209 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 FAM120BQ96EK7 910 aaKnown RBP20.94■□□□□ 0.94
ATG4D-209ENST00000588857 ZNF583Q96ND8 569 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 RBCK1Q9BYM8 510 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 PCDHAC1Q9H158 963 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 ZNF304Q9HCX3 659 aa20.94■□□□□ 0.94
ATG4D-209ENST00000588857 GMPR2Q9P2T1 348 aaKnown RBP20.94■□□□□ 0.94
ATG4D-209ENST00000588857 TMEM184BQ9Y519 407 aaPredicted RBP20.94■□□□□ 0.94
ATG4D-209ENST00000588857 PCNX2A6NKB5 2137 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 CLDN4O14493 209 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 LDB3O75112 727 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 SCRG1O75711 98 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 KRT75O95678 551 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 GPR75O95800 540 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 CCKBRP32239 447 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 CDK9P50750 372 aaKnown RBP20.93■□□□□ 0.94
ATG4D-209ENST00000588857 PDX1P52945 283 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 ACTR3P61158 418 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 MS4A2Q01362 244 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 TRAP1Q12931 704 aaKnown RBP20.93■□□□□ 0.94
ATG4D-209ENST00000588857 ZNF595Q8IYB9 648 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 SHISA5Q8N114 240 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 TNIP2Q8NFZ5 429 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 OR2T12Q8NG77 320 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 OR5AK3PQ8NH89 298 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 PSMA8Q8TAA3 256 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 SUN3Q8TAQ9 357 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 PNPT1Q8TCS8 783 aaKnown RBP20.93■□□□□ 0.94
ATG4D-209ENST00000588857 TBC1D20Q96BZ9 403 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 DPH2Q9BQC3 489 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-209ENST00000588857 GMEB1Q9Y692 573 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 RNF103-CHMP3A0A140T963 221 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 A0A1W2PS29 197 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 TMX2-CTNND1H3BSU7 103 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 HYAL3O43820 417 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-209ENST00000588857 FGF17O60258 216 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 ENTPD5O75356 428 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 HBQ1P09105 142 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 ATXN8OSP0DMR3 200 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 CPMP14384 443 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 PORP16435 677 aaPredicted RBP20.93■□□□□ 0.94
ATG4D-209ENST00000588857 GPX2P18283 190 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 FBLP22087 321 aaKnown RBP20.93■□□□□ 0.94
ATG4D-209ENST00000588857 XCR1P46094 333 aa20.93■□□□□ 0.94
ATG4D-209ENST00000588857 ID2Q02363 134 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms