RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TMEM121BQ9BXQ6 578 aaPredicted RBP24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 SEMA4GQ9NTN9 838 aa24.5■■□□□ 1.51
SCAMP4-210ENST00000588555 RNF103-CHMP3A0A140T963 221 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 TCRBV3S1A0A5B6 114 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 H0Y3Z8 333 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 ZNF749O43361 778 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 B4GALT2O60909 372 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 KCNK5O95279 499 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 MPIP34949 423 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 RCN1Q15293 331 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 ADRM1Q16186 407 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 SPATA24Q86W54 205 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 SAMD14Q8IZD0 417 aaPredicted RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 NEURL3Q96EH8 262 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 MVB12AQ96EY5 273 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 MMABQ96EY8 250 aaPredicted RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 FANCEQ9HB96 536 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 S100A14Q9HCY8 104 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 SIDT1Q9NXL6 827 aaKnown RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 MAGEL2Q9UJ55 1249 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 CLCA2Q9UQC9 943 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 FGF17O60258 216 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 RNH1P13489 461 aaKnown RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 XKP51811 444 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 MRPS22P82650 360 aaKnown RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 MAT1AQ00266 395 aaKnown RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 RHDQ02161 417 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 ACY1Q03154 408 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 FOLH1Q04609 750 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 COX20Q5RI15 118 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 SAXO2Q658L1 398 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 CPZQ66K79 652 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 TTLL10Q6ZVT0 673 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 PTOV1Q86YD1 416 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 OR4N5Q8IXE1 308 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 METTL27Q8N6F8 245 aaPredicted RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 TNIP2Q8NFZ5 429 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 TANKQ92844 425 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 PRRX2Q99811 253 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 TMEM9BQ9NQ34 198 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 COL27A1Q8IZC6 1860 aaPredicted RBP24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 SCN2AQ99250 2005 aa24.49■■□□□ 1.51
SCAMP4-210ENST00000588555 CBFA2T3O75081 653 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 PTGER1P34995 402 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 CHI3L1P36222 383 aaPredicted RBP24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 VAC14Q08AM6 782 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 CYP51A1Q16850 503 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 SYT16Q17RD7 645 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 GLYATQ6IB77 296 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 PROSER1Q86XN7 944 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 SPPL2CQ8IUH8 684 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 NAXDQ8IW45 347 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 ZZZ3Q8IYH5 903 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 LRRC25Q8N386 305 aaPredicted RBP24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 RASSF4Q9H2L5 321 aa24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 DHCR7Q9UBM7 475 aaKnown RBP24.48■■□□□ 1.51
SCAMP4-210ENST00000588555 AQP12BA6NM10 295 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 H3BNX3 289 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 LDB3O75112 727 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 STAMBPO95630 424 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 KRT75O95678 551 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 ZFP36L1Q07352 338 aaKnown RBP24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 SNCBQ16143 134 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 AASDHQ4L235 1098 aaPredicted RBP24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 YOD1Q5VVQ6 348 aaPredicted RBP24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 TMEM64Q6YI46 380 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 B3GNT8Q7Z7M8 397 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 RNF130Q86XS8 419 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 AQP12AQ8IXF9 295 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 ADAMTS18Q8TE60 1221 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 PEX11GQ96HA9 241 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 LRGUKQ96M69 825 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 SPATA9Q9BWV2 254 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 TRIM15Q9C019 465 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 TNFRSF21O75509 655 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 GPR75O95800 540 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 NUDT7P0C024 238 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 CPMP14384 443 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 GPC1P35052 558 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 CCT3P49368 545 aaKnown RBP24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 PDX1P52945 283 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 FADDQ13158 208 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 C16orf72Q14CZ0 275 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 CSRP2Q16527 193 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 PHF19Q5T6S3 580 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 ANGPTL8Q6UXH0 198 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 OR9A2Q8NGT5 310 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 ANKRD9Q96BM1 317 aaPredicted RBP24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 NDC1Q9BTX1 674 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 GORASP2Q9H8Y8 452 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 PARD6AQ9NPB6 346 aa24.47■■□□□ 1.51
SCAMP4-210ENST00000588555 TCRBV5S2A0A599 114 aa24.46■■□□□ 1.51
SCAMP4-210ENST00000588555 HYAL3O43820 417 aaPredicted RBP24.46■■□□□ 1.51
SCAMP4-210ENST00000588555 ETFAP13804 333 aa24.46■■□□□ 1.51
SCAMP4-210ENST00000588555 ARSFP54793 590 aa24.46■■□□□ 1.51
SCAMP4-210ENST00000588555 CASP9P55211 416 aa24.46■■□□□ 1.51
SCAMP4-210ENST00000588555 ID2Q02363 134 aa24.46■■□□□ 1.51
SCAMP4-210ENST00000588555 TRA2AQ13595 282 aaKnown RBP eCLIP24.46■■□□□ 1.51
SCAMP4-210ENST00000588555 VMACQ2NL98 169 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms