RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 C8orf74Q6P047 294 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PAOXQ6QHF9 649 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 LYPD8Q6UX82 237 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 MEX3BQ6ZN04 569 aaKnown RBP13.25□□□□□ -0.29
VMP1-206ENST00000587945 GK5Q6ZS86 529 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 CCDC91Q7Z6B0 441 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 CCDC71Q8IV32 467 aaPredicted RBP13.25□□□□□ -0.29
VMP1-206ENST00000587945 GOLM1Q8NBJ4 401 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 CDK15Q96Q40 435 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 SMC6Q96SB8 1091 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 SPOCK3Q9BQ16 436 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 CNPPD1Q9BV87 410 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 ERVK-6Q9BXR3 956 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 IL1RL2Q9HB29 575 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PNPLA3Q9NST1 481 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 SACM1LQ9NTJ5 587 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 MS4A12Q9NXJ0 267 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 PHF11Q9UIL8 331 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 ERVK-19Q9WJR5 959 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 RNF6Q9Y252 685 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 ASB4Q9Y574 426 aa13.25□□□□□ -0.29
VMP1-206ENST00000587945 NCOA6Q14686 2063 aaPredicted RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 A0A0A6YYD5 115 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 ATP6AP2A0A1C7CYW4 349 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 NKX2-6A6NCS4 301 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 H0YIV9 168 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 DYRK3O43781 588 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 OR10H2O60403 315 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 ATP6AP2O75787 350 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 FAM58BPP0C7Q3 252 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 POU3F2P20265 443 aaPredicted RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 SSTR2P30874 369 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 TLX1P31314 330 aaPredicted RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 BUD31P41223 144 aaPredicted RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 SERPINB8P50452 374 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 NUP107P57740 925 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 PHEXP78562 749 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 ZNF267Q14586 743 aaPredicted RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 ZNF791Q3KP31 576 aaPredicted RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 TECRLQ5HYJ1 363 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 NDUFAF5Q5TEU4 345 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 KLC3Q6P597 504 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 ADGRD1Q6QNK2 874 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 RGS9BPQ6ZS82 235 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 TRILQ7L0X0 811 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 FAM109AQ8N4B1 249 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 PTGR2Q8N8N7 351 aaPredicted RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 L3MBTL4Q8NA19 623 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 NUBPLQ8TB37 319 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 RND1Q92730 232 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 PHF21BQ96EK2 531 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 FBXL20Q96IG2 436 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 GAL3ST4Q96RP7 486 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 ENKD1Q9H0I2 346 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 NOL11Q9H8H0 719 aaKnown RBP13.24□□□□□ -0.29
VMP1-206ENST00000587945 SH2D2AQ9NP31 389 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
VMP1-206ENST00000587945 ADGRG4Q8IZF6 3080 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 IQANK1A0A1B0GTG1 560 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 A0A1W2PS29 197 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 CCDC189A1A4V9 331 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 OR7A17O14581 309 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 UGDHO60701 494 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 LRATO95237 230 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 ACSL3O95573 720 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 GPR75O95800 540 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 AIFM1O95831 613 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 IGHG3P01860 377 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 NR2F6P10588 404 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 CHRNB4P30926 498 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 PHBP35232 272 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 ARL1P40616 181 aaPredicted RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 CKAP4Q07065 602 aaKnown RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 PRAMEF20Q5VT98 475 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 ZNF585AQ6P3V2 769 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 ST13P4Q8IZP2 240 aaPredicted RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 ACBD4Q8NC06 268 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 OR52B6Q8NGF0 335 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 OR5M3Q8NGP4 307 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 LILRB4Q8NHJ6 448 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 WDR20Q8TBZ3 569 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 SLC22A8Q8TCC7 542 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 ASB5Q8WWX0 329 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 RIT1Q92963 219 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 REPS1Q96D71 796 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 ART5Q96L15 291 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 NSUN5Q96P11 429 aaKnown RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 ACSS3Q9H6R3 686 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 DDX31Q9H8H2 851 aaKnown RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 NPDC1Q9NQX5 325 aaPredicted RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 LYARQ9NX58 379 aaKnown RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 ITGB1BP2Q9UKP3 347 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 TNPO3Q9Y5L0 923 aaKnown RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.23□□□□□ -0.29
VMP1-206ENST00000587945 AKAP9Q99996 3911 aa13.23□□□□□ -0.29
VMP1-206ENST00000587945 OTOGQ6ZRI0 2925 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 PGRMC2O15173 223 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 URI1O94763 535 aaPredicted RBP13.22□□□□□ -0.29
VMP1-206ENST00000587945 CLDN9O95484 217 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms