RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 XPNPEP2O43895 674 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 GPR37L1O60883 481 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 MITFO75030 526 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SELENOWP63302 87 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 RELAQ04206 551 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PPP1R8Q12972 351 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ITGADQ13349 1161 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SIM2Q14190 667 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PLK5Q496M5 336 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 C11orf74Q86VG3 221 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 TMCO5AQ8N6Q1 288 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ATG16L2Q8NAA4 619 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 C11orf65Q8NCR3 313 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SLC37A2Q8TED4 501 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ZFP90Q8TF47 636 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ZDHHC1Q8WTX9 485 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PCBD2Q9H0N5 130 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 TMEM74BQ9NUR3 256 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ATAD3AQ9NVI7 634 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 THUMPD1Q9NXG2 353 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 CPNE7Q9UBL6 633 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SPASTQ9UBP0 616 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ENOPH1Q9UHY7 261 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 FBXO4Q9UKT5 387 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 TMEM131Q92545 1883 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 KIR2DS5A0A0G2JLQ3 304 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 A0A0G2JNG1 304 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 A0A1B0GVT2 93 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 B4DGG1 531 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 KIR2DS3K7RE56 304 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ANXA8P13928 327 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ITGA2P17301 1181 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 UGT2B10P36537 528 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 OPRL1P41146 370 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 KCNJ10P78508 379 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 MEF2AQ02078 507 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SLBPQ14493 270 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 KIR2DS5Q14953 304 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 OXA1LQ15070 435 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 RGNQ15493 299 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 GALNT5Q7Z7M9 940 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 AMIGO1Q86WK6 493 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 C17orf64Q86WR6 236 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 GKN2Q86XP6 184 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 RNF175Q8N4F7 328 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 DYNC2LI1Q8TCX1 351 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 WDR34Q96EX3 536 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SPNS1Q9H2V7 528 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 EHD1Q9H4M9 534 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ATP6V1HQ9UI12 483 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 DOLKQ9UPQ8 538 aa14.23□□□□□ -0.13
CDK5RAP3-236ENST00000584991 HEATR5BQ9P2D3 2071 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 GABRR3A8MPY1 467 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 FOXE1O00358 373 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SDC3O75056 442 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 FAM20BO75063 409 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 CPSF4O95639 269 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 LAMP1P11279 417 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 CDH3P22223 829 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 FMO3P31513 532 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 MAPK10P53779 464 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 MLLT10P55197 1068 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 HNRNPKP61978 463 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 UBE2IP63279 158 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 RPP38P78345 283 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PIGFQ07326 219 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 DDX39BQ13838 428 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 GPR18Q14330 331 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 TRIM16LQ309B1 348 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 TUBA3EQ6PEY2 450 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SLC30A8Q8IWU4 369 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 OR2A1Q8NGT9 310 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 MYDGFQ969H8 173 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 MTERF3Q96E29 417 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 DACH2Q96NX9 599 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 EFCAB11Q9BUY7 163 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SRMSQ9H3Y6 488 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 POT1Q9NUX5 634 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 CUEDC1Q9NWM3 386 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SPHK1Q9NYA1 384 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 TSC22D4Q9Y3Q8 395 aa14.22□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SNRNP200O75643 2136 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PIPSLA2A3N6 862 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 YY2O15391 372 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ZSCAN9O15535 394 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 AQP9O43315 295 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PRICKLE3O43900 615 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ANXA4P09525 319 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 GNSP15586 552 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PEBP1P30086 187 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ADPRMQ3LIE5 342 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 PAGE2BQ5JRK9 111 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ADNP2Q6IQ32 1131 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 MED27Q6P2C8 311 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 CCDC80Q76M96 950 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 FBXL6Q8N531 539 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 ZBTB8BQ8NAP8 495 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 OR7G3Q8NG95 312 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 OR6Q1Q8NGQ2 317 aa14.21□□□□□ -0.13
CDK5RAP3-236ENST00000584991 SNRNP27Q8WVK2 155 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms