RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 USH1CQ9Y6N9 552 aa13□□□□□ -0.33
TRAF4-215ENST00000584944 IGHV1-45A0A0A0MS14 117 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 IGHV3-20A0A0C4DH32 117 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 GOLGA8QA0A0J9YX86 632 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 GOLGA8OA6NCC3 632 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 A6NL46 340 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 GOLGA8NF8WBI6 632 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 MKRN2OSH3BPM6 223 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 SOCS6O14544 535 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 POLR3GO15318 223 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 AKAP10O43572 662 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 PRKRAO75569 313 aaKnown RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 LRATO95237 230 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 TGDSO95455 350 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 FURINP09958 794 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 FAM87AP0C7U9 286 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 CSNK2A2P19784 350 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 NTSP30990 170 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 MDH1P40925 334 aaKnown RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 XKP51811 444 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 PGDP52209 483 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 HNRNPFP52597 415 aaKnown RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 ERVK-8P63133 956 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 RAE1P78406 368 aaKnown RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 EMX2Q04743 252 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 ELAVL1Q15717 326 aaKnown RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 SMU1Q2TAY7 513 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 IL23RQ5VWK5 629 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 SLC48A1Q6P1K1 146 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 TMEM205Q6UW68 189 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 RGS9BPQ6ZS82 235 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 TMEM151BQ8IW70 566 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 SCUBE1Q8IWY4 988 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 LIX1Q8N485 282 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 ADAMTS17Q8TE56 1095 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 GFM2Q969S9 779 aaKnown RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 EXOSC8Q96B26 276 aaKnown RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 ART5Q96L15 291 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 C3orf30Q96M34 536 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 RILPQ96NA2 401 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 TRIM55Q9BYV6 548 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 NECTIN3Q9NQS3 549 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 TEKT2Q9UIF3 430 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 CCL27Q9Y4X3 112 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 HEMK1Q9Y5R4 338 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-215ENST00000584944 KCNMB2Q9Y691 235 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 HECTD1Q9ULT8 2610 aa12.99□□□□□ -0.33
TRAF4-215ENST00000584944 MAST4O15021 2626 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 MYOCOSA0A1B0GUC4 107 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 C17orf105B2RV13 164 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 NPIPB8E9PQR5 432 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 PGRMC2O15173 223 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 FGF17O60258 216 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 JUNP05412 331 aaKnown RBP12.98□□□□□ -0.33
TRAF4-215ENST00000584944 SFTPCP11686 197 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 BCKDHAP12694 445 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 PORP16435 677 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-215ENST00000584944 PCSK2P16519 638 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 DDCP20711 480 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 EPHA3P29320 983 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 MPIP34949 423 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 AQP5P55064 265 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 CHAF1BQ13112 559 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 TERF2Q15554 542 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 SPATA19Q7Z5L4 167 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 LRRC34Q8IZ02 419 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 LRRC25Q8N386 305 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-215ENST00000584944 TMEM52Q8NDY8 209 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 OR14A16Q8NHC5 309 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 CEP70Q8NHQ1 597 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 CLHC1Q8NHS4 586 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 RIT1Q92963 219 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
TRAF4-215ENST00000584944 ZBTB18Q99592 522 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 SIKE1Q9BRV8 207 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 NPHS2Q9NP85 383 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 ATAD3AQ9NVI7 634 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAF4-215ENST00000584944 EHD3Q9NZN3 535 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 SH3BP4Q9P0V3 963 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 GIMAP2Q9UG22 337 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 BAIAP2L1Q9UHR4 511 aa12.98□□□□□ -0.33
TRAF4-215ENST00000584944 NAV2Q8IVL1 2488 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 LOC102723996A0A087X1L8 192 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 IGKV3D-11A0A0A0MRZ8 115 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 CYSRT1A8MQ03 144 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 SUV39H1O43463 412 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 SLC35E2P0CK97 266 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 COX6A1P12074 109 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 SDC1P18827 310 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 PRPS1L1P21108 318 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 NT5EP21589 574 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 FEN1P39748 380 aaKnown RBP12.97□□□□□ -0.33
TRAF4-215ENST00000584944 STT3AP46977 705 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 POLE2P56282 527 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 STX1BP61266 288 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 VWA5B1Q5TIE3 1220 aa12.97□□□□□ -0.33
TRAF4-215ENST00000584944 ATG14Q6ZNE5 492 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms