RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 CA4P22748 312 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SLC15A1P46059 708 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 OR1G1P47890 313 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 GPC3P51654 580 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 CCR3P51677 355 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 MRPL12P52815 198 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 CDH8P55286 799 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 AP1B1Q10567 949 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 LY6DQ14210 128 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 IRF3Q14653 427 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SLMAPQ14BN4 828 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 MORF4L2Q15014 288 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 E2F5Q15329 346 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ZNF674Q2M3X9 581 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 WLSQ5T9L3 541 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ACSM2BQ68CK6 577 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ADALQ6DHV7 355 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 FUT10Q6P4F1 479 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ALKBH5Q6P6C2 394 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 IYDQ6PHW0 289 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 CASC1Q6TDU7 716 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 CHST9Q7L1S5 443 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ADIPOR2Q86V24 386 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 TICAM1Q8IUC6 712 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ZNF584Q8IVC4 421 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 LINC00346Q8IVM7 164 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 DEFB119Q8N690 84 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 METTL13Q8N6R0 699 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 MAPKAPK5-AS1Q8N8E1 139 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SYT2Q8N9I0 419 aaPredicted RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 TRIML1Q8N9V2 468 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 STKLD1Q8NE28 680 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 Q8NFD4 153 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 KBTBD8Q8NFY9 601 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 MOSPD2Q8NHP6 518 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 RLN3Q8WXF3 142 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SEPT1Q8WYJ6 367 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 FAM3CQ92520 227 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SLCO2A1Q92959 643 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SLC22A18Q96BI1 424 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ERLEC1Q96DZ1 483 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SIPA1Q96FS4 1042 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 PGAM5Q96HS1 289 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 DACH2Q96NX9 599 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 GCNAQ96QF7 691 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 NUDCD1Q96RS6 583 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 GAD1Q99259 594 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 ABHD6Q9BV23 337 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 MRPL1Q9BYD6 325 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 ABCG4Q9H172 646 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 TSPY26PQ9H489 355 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 NXF3Q9H4D5 531 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 PRORYQ9H606 182 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 COPS7BQ9H9Q2 264 aaPredicted RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 TMEM9BQ9NQ34 198 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 MRPL17Q9NRX2 175 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 GTSE1Q9NYZ3 720 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 NUDT4Q9NZJ9 180 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 MOSPD1Q9UJG1 213 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 RARRES3Q9UL19 164 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 PPIEQ9UNP9 301 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 SPIN1Q9Y657 262 aaPredicted RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 SLCO1B1Q9Y6L6 691 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SESN1Q9Y6P5 492 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 TNRC6AQ8NDV7 1962 aaKnown RBP2.3□□□□□ -2.04
VAPA-208ENST00000584796 RP1P56715 2156 aa2.3□□□□□ -2.04
VAPA-208ENST00000584796 SHANK1Q9Y566 2161 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 IGLV3-22A0A075B6J6 115 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 hCG_1809904A0A1W2PP81 198 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 A0A1W2PPE2 198 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 A0A1W2PR64 198 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ELOVL7A1L3X0 281 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 TRABD2BA6NFA1 517 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 CASTOR2A6NHX0 329 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 CCDC69A6NI79 296 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 HEPACAM2A8MVW5 462 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 A8MZ25 164 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 E9PI62 339 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 FAM86B1E9PN63 330 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 SPECC1L-ADORA2AF8WAN1 911 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 M0QZ92 97 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 CTDSP2O14595 271 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 B4GALT5O43286 388 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 STX6O43752 255 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 FMO6PO60774 539 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ECI2O75521 394 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 B3GALNT1O75752 331 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 OR2C1O95371 312 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 IGKV3-15P01624 115 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 IGHV3-13P01766 116 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 ABCB1P08183 1280 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 FAM86B2P0C5J1 330 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 HLA-DPA1P20036 260 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 CSRP1P21291 193 aaKnown RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 CA6P23280 308 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 CDC25CP30307 473 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 HPDP32754 393 aaPredicted RBP2.29□□□□□ -2.04
VAPA-208ENST00000584796 MAGEA9P43362 315 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 LIG4P49917 911 aa2.29□□□□□ -2.04
VAPA-208ENST00000584796 GALCP54803 685 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms