RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 PPIAP62937 165 aaKnown RBP18.94■□□□□ 0.62
SHMT1-209ENST00000582653 CEP128Q6ZU80 1094 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 OR52B6Q8NGF0 335 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 TANKQ92844 425 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 ATP6V1E2Q96A05 226 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 REPS1Q96D71 796 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 C14orf79Q96F83 325 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 RBM18Q96H35 190 aaKnown RBP18.94■□□□□ 0.62
SHMT1-209ENST00000582653 SGCZQ96LD1 299 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 NSUN5Q96P11 429 aaKnown RBP18.94■□□□□ 0.62
SHMT1-209ENST00000582653 FMO2Q99518 471 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 TP63Q9H3D4 680 aaPredicted RBP18.94■□□□□ 0.62
SHMT1-209ENST00000582653 ZDHHC11Q9H8X9 412 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 COPS7AQ9UBW8 275 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 PHF11Q9UIL8 331 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 ASB4Q9Y574 426 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 OTOGQ6ZRI0 2925 aa18.94■□□□□ 0.62
SHMT1-209ENST00000582653 PKDREJQ9NTG1 2253 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 A0A0A6YYD5 115 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 A0A1W2PR48 441 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 FAM166BA8MTA8 275 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 CLDN9O95484 217 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 TLX1P31314 330 aaPredicted RBP18.93■□□□□ 0.62
SHMT1-209ENST00000582653 PHEXP78562 749 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 PLGLB1Q02325 96 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 ASPHQ12797 758 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 CUL3Q13618 768 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 EMC4Q5J8M3 183 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 MRM1Q6IN84 353 aaKnown RBP18.93■□□□□ 0.62
SHMT1-209ENST00000582653 OPN5Q6U736 354 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 RTL4Q6ZR62 310 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 RPS27LQ71UM5 84 aaKnown RBP18.93■□□□□ 0.62
SHMT1-209ENST00000582653 C9orf40Q8IXQ3 194 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 MARVELD2Q8N4S9 558 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 LILRB4Q8NHJ6 448 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 ASB5Q8WWX0 329 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 ISL2Q96A47 359 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 TREX2Q9BQ50 279 aaPredicted RBP18.93■□□□□ 0.62
SHMT1-209ENST00000582653 DDX31Q9H8H2 851 aaKnown RBP18.93■□□□□ 0.62
SHMT1-209ENST00000582653 XPR1Q9UBH6 696 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 IKBKGQ9Y6K9 419 aa18.93■□□□□ 0.62
SHMT1-209ENST00000582653 ACOT7O00154 380 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 GLSO94925 669 aaPredicted RBP18.92■□□□□ 0.62
SHMT1-209ENST00000582653 IGKV3-11P04433 115 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 RBP1P09455 135 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 FAM58BPP0C7Q3 252 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 ALOX15P16050 662 aaPredicted RBP18.92■□□□□ 0.62
SHMT1-209ENST00000582653 CAPN3P20807 821 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 BUD31P41223 144 aaPredicted RBP18.92■□□□□ 0.62
SHMT1-209ENST00000582653 ARFIP1P53367 373 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 MPEG1Q2M385 716 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 GXYLT1Q4G148 440 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 PIGGQ5H8A4 983 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 NDUFAF5Q5TEU4 345 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 CYP20A1Q6UW02 462 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 SLC22A16Q86VW1 577 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 GOLM1Q8NBJ4 401 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 DCAKDQ8WVC6 231 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 FAM173AQ9BQD7 235 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 TTTY12Q9BZ98 90 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 TSPYL1Q9H0U9 437 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 ZBTB26Q9HCK0 441 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 PCTPQ9UKL6 214 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 ADGRG4Q8IZF6 3080 aa18.92■□□□□ 0.62
SHMT1-209ENST00000582653 A0A1W2PS29 197 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 TRIM49D1C9J1S8 452 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 FOXE1O00358 373 aaPredicted RBP18.91■□□□□ 0.62
SHMT1-209ENST00000582653 GPR75O95800 540 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 CTAGE8P0CG41 777 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 CCL3P10147 92 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 DNASE1L1P49184 302 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 SERPINB9P50453 376 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 CCNG1P51959 295 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 PLIN5Q00G26 463 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 FAM219BQ5XKK7 198 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 METTL2BQ6P1Q9 378 aaKnown RBP18.91■□□□□ 0.62
SHMT1-209ENST00000582653 CTAGE4Q8IX94 777 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 MNS1Q8NEH6 495 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 RND1Q92730 232 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 CNPPD1Q9BV87 410 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 LYARQ9NX58 379 aaKnown RBP18.91■□□□□ 0.62
SHMT1-209ENST00000582653 PSD3Q9NYI0 1048 aa18.91■□□□□ 0.62
SHMT1-209ENST00000582653 A0A1B0GTL3 188 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 STX16-NPEPL1H3BU86 382 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 STX16O14662 325 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 PGRMC2O15173 223 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 DYRK3O43781 588 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 SMIM24O75264 130 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 KRT38O76015 456 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 AIFM1O95831 613 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 IGHG3P01860 377 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 NR2F6P10588 404 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 CHRNB4P30926 498 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 HERVK_113P63132 956 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 ERVK-8P63133 956 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 TRAF3Q13114 568 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 ZNF267Q14586 743 aaPredicted RBP18.9■□□□□ 0.62
SHMT1-209ENST00000582653 HYAL4Q2M3T9 481 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 SGO1Q5FBB7 561 aa18.9■□□□□ 0.62
SHMT1-209ENST00000582653 TTC19Q6DKK2 380 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms