RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 PIK3CBP42338 1070 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 PAFAH1B1P43034 410 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 ARFIP1P53367 373 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 FOXD4Q12950 439 aaPredicted RBP9.77□□□□□ -0.85
RFFL-209ENST00000581265 MYBPHQ13203 477 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 SLAMF1Q13291 335 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 SLC25A35Q3KQZ1 300 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 C1orf185Q5T7R7 199 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 CAPN12Q6ZSI9 719 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 C3orf62Q6ZUJ4 267 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 Q71RC1 249 aaPredicted RBP9.77□□□□□ -0.85
RFFL-209ENST00000581265 GPR180Q86V85 440 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 C9orf40Q8IXQ3 194 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 DND1Q8IYX4 353 aaKnown RBP9.77□□□□□ -0.85
RFFL-209ENST00000581265 SLC22A8Q8TCC7 542 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 RGMAQ96B86 450 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 PPWD1Q96BP3 646 aaKnown RBP9.77□□□□□ -0.85
RFFL-209ENST00000581265 SPACA9Q96E40 222 aaPredicted RBP9.77□□□□□ -0.85
RFFL-209ENST00000581265 FBXL20Q96IG2 436 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 ART5Q96L15 291 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 DGAT2Q96PD7 388 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 CNPPD1Q9BV87 410 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 OR51B5Q9H339 312 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 LDAHQ9H6V9 325 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 NMRAL1Q9HBL8 299 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 PROK2Q9HC23 129 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 ZFP64Q9NPA5 681 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 QPCTLQ9NXS2 382 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 CNIH4Q9P003 139 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 WHRNQ9P202 907 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 RNF112Q9ULX5 631 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 TSC22D4Q9Y3Q8 395 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 L3MBTL1Q9Y468 752 aa9.77□□□□□ -0.85
RFFL-209ENST00000581265 NINQ8N4C6 2090 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ACANP16112 2415 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ANKRD33BA6NCL7 494 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 K7EPI3 171 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 HRKO00198 91 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 SAP18O00422 153 aaKnown RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 SYT5O00445 386 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 SH3BGRLO75368 114 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 GSTA2P09210 222 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 FBXO45P0C2W1 286 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 RFPL3SP0C7P2 107 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 PCNAP12004 261 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ENDOUP21128 410 aaKnown RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 SERPINB3P29508 390 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 TLX1P31314 330 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 SPRP35270 261 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 SSR2P43308 183 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 GNG11P61952 73 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 KCNJ2P63252 427 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 PLIN5Q00G26 463 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 FOLH1Q04609 750 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 RIPPLY2Q5TAB7 128 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 GRTP1Q5TC63 336 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ARSKQ6UWY0 536 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 DGAT2L6Q6ZPD8 337 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ST13P4Q8IZP2 240 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 LRRC25Q8N386 305 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 ZCCHC7Q8N3Z6 543 aaKnown RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 HUS1BQ8NHY5 278 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 UBTD2Q8WUN7 234 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ATOH8Q96SQ7 321 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 MDFIQ99750 246 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 CENPKQ9BS16 269 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ERP44Q9BS26 406 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 CXXC4Q9H2H0 198 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 KCNF1Q9H3M0 494 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ALG9Q9H6U8 611 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 ZNF703Q9H7S9 590 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 SAYSD1Q9NPB0 183 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 CCM2LQ9NUG4 571 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.76□□□□□ -0.85
RFFL-209ENST00000581265 ALKBH4Q9NXW9 302 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 NUDT4Q9NZJ9 180 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 SPRR3Q9UBC9 169 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 OPTCQ9UBM4 332 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 B4GALT7Q9UBV7 327 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 PHF11Q9UIL8 331 aa9.76□□□□□ -0.85
RFFL-209ENST00000581265 BOKQ9UMX3 212 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 CHCHD2Q9Y6H1 151 aaPredicted RBP9.76□□□□□ -0.85
RFFL-209ENST00000581265 MAP1AP78559 2803 aaPredicted RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 IQANK1A0A1B0GTG1 560 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 LRRC3CA6NJW4 275 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 PLPP1O14494 284 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 PROM1O43490 865 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 KERAO60938 352 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 GPR75O95800 540 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 SLC35E2BP0CK96 405 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 MTHFD2P13995 350 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 ALOX15P16050 662 aaPredicted RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 EPB42P16452 691 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 PTX3P26022 381 aaPredicted RBP9.75□□□□□ -0.85
RFFL-209ENST00000581265 CRABP2P29373 138 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 GALNSP34059 522 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 GMPRP36959 345 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 PEX19P40855 299 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 SLC37A1P57057 533 aa9.75□□□□□ -0.85
RFFL-209ENST00000581265 GPX6P59796 221 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms