RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ACTL8Q9H568 366 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 SAR1AQ9NR31 198 aa13.41□□□□□ -0.26
SKA2-205ENST00000580541 ACSS1Q9NUB1 689 aaPredicted RBP13.41□□□□□ -0.26
SKA2-205ENST00000580541 PRSS51A0A1B0GVH4 220 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 TMEM8BA6NDV4 472 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 TERTO14746 1132 aaKnown RBP13.4□□□□□ -0.26
SKA2-205ENST00000580541 ANKRD28O15084 1053 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 CFLARO15519 480 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 PDPK1O15530 556 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 KLK10O43240 276 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 ICAM2P13598 275 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 CPMP14384 443 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 MAOAP21397 527 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 STT3AP46977 705 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 OR4D2P58180 307 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 AP2B1P63010 937 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 IGLV3-21P80748 117 aaPredicted RBP13.4□□□□□ -0.26
SKA2-205ENST00000580541 CLN3Q13286 438 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 TGIF1Q15583 401 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 CRTC2Q53ET0 693 aaPredicted RBP13.4□□□□□ -0.26
SKA2-205ENST00000580541 PAOXQ6QHF9 649 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 TMEM205Q6UW68 189 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 SHISA6Q6ZSJ9 500 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 MSANTD1Q6ZTZ1 278 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 KRTCAP2Q8N6L1 136 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 OR7A2PQ8NGA2 310 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 GATA6Q92908 595 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 SLC45A3Q96JT2 553 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 ART5Q96L15 291 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 CCNL2Q96S94 520 aaPredicted RBP13.4□□□□□ -0.26
SKA2-205ENST00000580541 ADAP2Q9NPF8 381 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 FAM120CQ9NX05 1096 aaKnown RBP13.4□□□□□ -0.26
SKA2-205ENST00000580541 CCDC167Q9P0B6 97 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 CAPN7Q9Y6W3 813 aa13.4□□□□□ -0.26
SKA2-205ENST00000580541 IGKV3D-11A0A0A0MRZ8 115 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 A0A1W2PRB8 838 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 TCRBV16S1A1N1A0A5B0 115 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 CCDC154A6NI56 674 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 ZNF891A8MT65 544 aaPredicted RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 MYO1GB0I1T2 1018 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 RNASET2O00584 256 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 FCHO1O14526 889 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 FGF17O60258 216 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 CNOT3O75175 753 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 BCAS2O75934 225 aaPredicted RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 PGRP06401 933 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 LIFP15018 202 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 FEN1P39748 380 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 HNRNPFP52597 415 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 CBX1P83916 185 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 STX5Q13190 355 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 MLC1Q15049 377 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 TERF2Q15554 542 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 ELAVL1Q15717 326 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 CEBPEQ15744 281 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 UGT8Q16880 541 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 FAM174BQ3ZCQ3 159 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 BLOC1S3Q6QNY0 202 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 CPEB2Q7Z5Q1 589 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 OR4N5Q8IXE1 308 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 CCDC116Q8IYX3 515 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 DNAJB8Q8NHS0 232 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 THAP4Q8WY91 577 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 OR5P2Q8WZ92 322 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 RIT1Q92963 219 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 ERP27Q96DN0 273 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 CMTM5Q96DZ9 223 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 NAF1Q96HR8 494 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 OR52E6Q96RD3 313 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 LPAR4Q99677 370 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 SLC25A23Q9BV35 468 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 NECTIN3Q9NQS3 549 aa13.39□□□□□ -0.27
SKA2-205ENST00000580541 PNO1Q9NRX1 252 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 EXO1Q9UQ84 846 aaKnown RBP13.39□□□□□ -0.27
SKA2-205ENST00000580541 NUP210LQ5VU65 1888 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 LOC102723996A0A087X1L8 192 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 PRKRAO75569 313 aaKnown RBP13.38□□□□□ -0.27
SKA2-205ENST00000580541 ATP1B1P05026 303 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 UMODP07911 640 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 SNRPB2P08579 225 aaKnown RBP13.38□□□□□ -0.27
SKA2-205ENST00000580541 LAMP1P11279 417 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 NT5EP21589 574 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 OTX2P32243 289 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 GPC1P35052 558 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.27
SKA2-205ENST00000580541 UCNP55089 124 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 KLF10Q13118 480 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 MAPKAPK3Q16644 382 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 FAAH2Q6GMR7 532 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 BHLHB9Q6PI77 547 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 NDUFAF7Q7L592 441 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 ANKRD37Q7Z713 158 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 MMP21Q8N119 569 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 TRIML2Q8N7C3 387 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 OR14A16Q8NHC5 309 aa13.38□□□□□ -0.27
SKA2-205ENST00000580541 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
SKA2-205ENST00000580541 SPDL1Q96EA4 605 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms