RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 C21orf58P58505 322 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 PPP1CAP62136 330 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 RPS15AP62244 130 aaKnown RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 SLC34A1Q06495 639 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 IL10RAQ13651 578 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 GPR18Q14330 331 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 PAGE3Q5JUK9 113 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 CCNYL2Q5T2Q4 361 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 DEPDC1Q5TB30 811 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 NANOGP8Q6NSW7 305 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 C8orf82Q6P1X6 216 aaPredicted RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 SPATA24Q86W54 205 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 DHFR2Q86XF0 187 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.61□□□□□ -0.87
SS18-210ENST00000578700 METTL4Q8N3J2 472 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 RNF175Q8N4F7 328 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 NATD1Q8N6N6 113 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 ZNF740Q8NDX6 193 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 BHLHE22Q8NFJ8 381 aaPredicted RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 FDCSPQ8NFU4 85 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 OR8J3Q8NGG0 315 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 KLHL6Q8WZ60 621 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 GFM2Q969S9 779 aaKnown RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 MTERF3Q96E29 417 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 TCTN2Q96GX1 697 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 CGREF1Q99674 301 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 ECSITQ9BQ95 431 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 DPH7Q9BTV6 452 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 THUMPD3Q9BV44 507 aaKnown RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 GPR87Q9BY21 358 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 OR51B5Q9H339 312 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 ALG2Q9H553 416 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 NANOGQ9H9S0 305 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 UCK1Q9HA47 277 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 SLC52A3Q9NQ40 469 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 MIEF1Q9NQG6 463 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 FAM120CQ9NX05 1096 aaKnown RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 STX18Q9P2W9 335 aaKnown RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 ABCD2Q9UBJ2 740 aa9.61□□□□□ -0.87
SS18-210ENST00000578700 ERRFI1Q9UJM3 462 aaPredicted RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 PCDHGA9Q9Y5G4 932 aaKnown RBP9.61□□□□□ -0.87
SS18-210ENST00000578700 IGHV5-51A0A0C4DH38 117 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 FEZF1A0PJY2 475 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 OR6C74A6NCV1 312 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 EVPLLA8MZ36 301 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SAP18O00422 153 aaKnown RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 RFXANKO14593 260 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SCAMP2O15127 329 aaKnown RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 GSTA4O15217 222 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 NDUFS4O43181 175 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 KRT36O76013 467 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 ETHE1O95571 254 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 BAG2O95816 211 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 KLK1P06870 262 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 TACR1P25103 407 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 ZFP36L2P47974 494 aaKnown RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 HNRNPFP52597 415 aaKnown RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 ARFIP1P53367 373 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 MAPK12P53778 367 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SESN3P58005 492 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 STXBP1P61764 594 aaKnown RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 ACY1Q03154 408 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 LIPEQ05469 1076 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 CCNIQ14094 377 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 HEPACAMQ14CZ8 416 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SLC5A12Q1EHB4 618 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 HKDC1Q2TB90 917 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 FAM69BQ5VUD6 431 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SLC6A19Q695T7 634 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 ADNP2Q6IQ32 1131 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 PRSS42Q7Z5A4 293 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 TMEM126BQ8IUX1 230 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 RIMKLAQ8IXN7 391 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SLC15A3Q8IY34 581 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 CISD2Q8N5K1 135 aaKnown RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 ZNF655Q8N720 491 aaPredicted RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 Q8NA96 180 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 OR8J2Q8NGG1 315 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 GTF2H4Q92759 462 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 POP5Q969H6 163 aaKnown RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 PPCDCQ96CD2 204 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 PPM1MQ96MI6 270 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 PANX1Q96RD7 426 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 MAP3K3Q99759 626 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SLC39A3Q9BRY0 314 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 DUSP26Q9BV47 211 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 NUDT9Q9BW91 350 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 MS4A8Q9BY19 250 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 BHLHE41Q9C0J9 482 aaPredicted RBP9.6□□□□□ -0.87
SS18-210ENST00000578700 ROGDIQ9GZN7 287 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 SPNS1Q9H2V7 528 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 REEP4Q9H6H4 257 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 S100A14Q9HCY8 104 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 MYNNQ9NPC7 610 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 ADAM29Q9UKF5 820 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 CORO2BQ9UQ03 480 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 AP1M2Q9Y6Q5 423 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 C2CD3Q4AC94 2353 aa9.6□□□□□ -0.87
SS18-210ENST00000578700 DIDO1Q9BTC0 2240 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms