RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 VN1R4Q7Z5H5 301 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 FAM20CQ8IXL6 584 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 SIX5Q8N196 739 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 LRRC25Q8N386 305 aaPredicted RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 LINC00471Q8N535 108 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 ATG16L2Q8NAA4 619 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 PIK3C3Q8NEB9 887 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 MIPOL1Q8TD10 442 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 LMX1AQ8TE12 382 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 GIPC3Q8TF64 312 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 RLN3Q8WXF3 142 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 TANKQ92844 425 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 MAL2Q969L2 176 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 CLDN23Q96B33 292 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 DGCR14Q96DF8 476 aaKnown RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 TCTN2Q96GX1 697 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 SMIM10Q96HG1 83 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 CD180Q99467 661 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 NRTNQ99748 197 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 BTBD2Q9BX70 525 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 ANKHQ9HCJ1 492 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 PDP1Q9P0J1 537 aaPredicted RBP10.52□□□□□ -0.73
SKA2-204ENST00000578519 SLC13A4Q9UKG4 626 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 PILRAQ9UKJ1 303 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 TMCC3Q9ULS5 477 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 ATG4BQ9Y4P1 393 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 AK5Q9Y6K8 562 aa10.52□□□□□ -0.73
SKA2-204ENST00000578519 LOC100130705A0A1B0GUX0 176 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 A0A1W2PR77 199 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 KRBA1A5PL33 1030 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 B4DGG1 531 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 H0YGG7 62 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 hCG_2039718K7EN88 272 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 DLGAP1O14490 977 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 JRKO75564 520 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 DNAJB5O75953 348 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 UBXN7O94888 489 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 PGM3O95394 542 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 BCHEP06276 602 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 TFPTP0C1Z6 253 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 ETS2P15036 469 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 AQP1P29972 269 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 RYKP34925 604 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 CDK9P50750 372 aaKnown RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 EPHA4P54764 986 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 ARF3P61204 181 aaPredicted RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 TFF2Q03403 129 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 BIKQ13323 160 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 C1orf61Q13536 156 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 KEAP1Q14145 624 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 ZIK1Q3SY52 487 aaPredicted RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 ZNF542PQ5EBM4 170 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 TNFAIP8L2Q6P589 184 aaPredicted RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 TBPL2Q6SJ96 375 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 ZNF438Q7Z4V0 828 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 VTCN1Q7Z7D3 282 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 CCDC116Q8IYX3 515 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 TAGAPQ8N103 731 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 CARFQ8N187 725 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 CSNK1A1LQ8N752 337 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 HORMAD2Q8N7B1 307 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 NUP43Q8NFH3 380 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 FLVCR1-AS1Q8TAF5 88 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 XAGE5Q8WWM1 108 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 HDAC2Q92769 488 aaKnown RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 ZDHHC12Q96GR4 267 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 TMEM19Q96HH6 336 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 C7orf34Q96L11 122 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 ZNF300Q96RE9 604 aaPredicted RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 PIP5K1AQ99755 562 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 MIR1-1HGQ9H1L0 117 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 OR51I1Q9H343 314 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 TOR3AQ9H497 397 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 EVA1AQ9H8M9 152 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 TBC1D17Q9HA65 648 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 SMURF2Q9HAU4 748 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 BCL2L10Q9HD36 194 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 KRT84Q9NSB2 600 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 SIRT3Q9NTG7 399 aaPredicted RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 GPATCH2Q9NW75 528 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 PTGFRNQ9P2B2 879 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 SEC14L3Q9UDX4 400 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 ACSL6Q9UKU0 697 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 CES1P1Q9UKY3 287 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 POMT2Q9UKY4 750 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 CLCA2Q9UQC9 943 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 MRPS33Q9Y291 106 aaKnown RBP10.51□□□□□ -0.73
SKA2-204ENST00000578519 SLC9A8Q9Y2E8 581 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 KLHL20Q9Y2M5 609 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 ENPP4Q9Y6X5 453 aa10.51□□□□□ -0.73
SKA2-204ENST00000578519 RHPN2P1A8MT19 583 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 PGRMC2O15173 223 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 AQP9O43315 295 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 SEC24DO94855 1032 aaPredicted RBP10.5□□□□□ -0.73
SKA2-204ENST00000578519 EIF2S1P05198 315 aaKnown RBP10.5□□□□□ -0.73
SKA2-204ENST00000578519 PROS1P07225 676 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 OR12D1P0DN82 309 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 IL9P15248 144 aa10.5□□□□□ -0.73
SKA2-204ENST00000578519 PORP16435 677 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms