RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 MYOGP15173 224 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SLC15A1P46059 708 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 GZMMP51124 257 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 KRR1Q13601 381 aaKnown RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 KEAP1Q14145 624 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 OXA1LQ15070 435 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 DHCR24Q15392 516 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 LAX1Q8IWV1 398 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 METTL4Q8N3J2 472 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 RHOXF1Q8NHV9 184 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 WDR20Q8TBZ3 569 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 ZCCHC2Q9C0B9 1178 aaKnown RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 RACGAP1Q9H0H5 632 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 NECTIN3Q9NQS3 549 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 GPATCH2Q9NW75 528 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 UCKL1Q9NWZ5 548 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 AHSPQ9NZD4 102 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 HS3ST2Q9Y278 367 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SCN2BO60939 215 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 H1F0P07305 194 aaKnown RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 CEBPBP17676 345 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 PTPN2P17706 415 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 NDUFA5Q16718 116 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SYT6Q5T7P8 510 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 FCRLBQ6BAA4 426 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SLC38A5Q8WUX1 472 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 IPCEF1Q8WWN9 437 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SMG7Q92540 1137 aaKnown RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 RAD51AP1Q96B01 352 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 C7orf34Q96L11 122 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 LRR1Q96L50 414 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SLIRPQ9GZT3 109 aaKnown RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 TP63Q9H3D4 680 aaPredicted RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 ZNF226Q9NYT6 803 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SLC23A2Q9UGH3 650 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SCN5AQ14524 2016 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 CDK1P06493 297 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 IL18R1Q13478 541 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 PRSS53Q2L4Q9 553 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 REEP3Q6NUK4 255 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 TMEM107Q6UX40 140 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 TRAM1L1Q8N609 369 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 TRIM63Q969Q1 353 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 TRMT2BQ96GJ1 504 aaKnown RBP12.99□□□□□ -0.33
NDEL1-204ENST00000578172 C16orf58Q96GQ5 468 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 LGR4Q9BXB1 951 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 UCK2Q9BZX2 261 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SLC6A17Q9H1V8 727 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 EGLN3Q9H6Z9 239 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 AKIP1Q9NQ31 210 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 PRKAG2Q9UGJ0 569 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 MKLN1Q9UL63 735 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 SPEF1Q9Y4P9 236 aa12.99□□□□□ -0.33
NDEL1-204ENST00000578172 ZSCAN5BA6NJL1 495 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 PRRT4C9JH25 899 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 PITPNM1O00562 1244 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 MPC1LP0DKB6 136 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 PPIBP23284 216 aaKnown RBP12.98□□□□□ -0.33
NDEL1-204ENST00000578172 FRMPD2BQ6IN97 320 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 NXPE4Q6UWF7 544 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 SLC39A5Q6ZMH5 540 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 ZNF730Q6ZMV8 503 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 NRARPQ7Z6K4 114 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 SYNPOQ8N3V7 929 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 OR8J2Q8NGG1 315 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 OR8D1Q8WZ84 308 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 TMEM246Q9BRR3 403 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 OR51I1Q9H343 314 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 H2AFY2Q9P0M6 372 aaPredicted RBP12.98□□□□□ -0.33
NDEL1-204ENST00000578172 PSORS1C1Q9UIG5 152 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 SSR3Q9UNL2 185 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 CABIN1Q9Y6J0 2220 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 A0A1W2PQ72 361 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 NDUFS4O43181 175 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 GREM1O60565 184 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 PLOD3O60568 738 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 ADH5P11766 374 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 GPR4P46093 362 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 NCF4Q15080 339 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 CNKSR3Q6P9H4 555 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 HSDL2Q6YN16 418 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 LACC1Q8IV20 430 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 OXR1Q8N573 874 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 OR52N2Q8NGI0 321 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 BBS10Q8TAM1 723 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 TIFAQ96CG3 184 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 AIF1LQ9BQI0 150 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 EFCAB11Q9BUY7 163 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 HDHD2Q9H0R4 259 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 MVB12BQ9H7P6 319 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 CORO2BQ9UQ03 480 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 PCDHGB6Q9Y5F9 930 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 NPIPA5A0A0B4J1W7 369 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 CCDC182A6NF36 153 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 AGAP5A6NIR3 686 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 NPIPA7E9PJI5 369 aa12.98□□□□□ -0.33
NDEL1-204ENST00000578172 UPK1BO75841 260 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms