RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 RC3H2Q9HBD1 1191 aaKnown RBP8.13□□□□□ -1.11
RPAIN-215ENST00000575112 PIPSLA2A3N6 862 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 MEIOCA2RUB1 952 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 FCER2P06734 321 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CA3P07451 260 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 OR12D1P0DN82 309 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 DNAJA1P31689 397 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 HTR2BP41595 481 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 UGT2B15P54855 530 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CLDN2P57739 230 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 PFN3P60673 137 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 KEAP1Q14145 624 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 NNATQ16517 81 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SPATS1Q496A3 300 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ZC3H14Q6PJT7 736 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ZNF517Q6ZMY9 492 aaPredicted RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 MACC1Q6ZN28 852 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 VN1R5Q7Z5H4 357 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ZZZ3Q8IYH5 903 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 PRSS58Q8IYP2 241 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SETD9Q8NE22 299 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ASB15Q8WXK1 588 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 PEX13Q92968 403 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CMTM7Q96FZ5 175 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 RNF170Q96K19 258 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 WBP11Q9Y2W2 641 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CPSF4LA6NMK7 179 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 M0R3H8 397 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 MID1O15344 667 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ERI3O43414 337 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SOCS5O75159 536 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CDC123O75794 336 aaPredicted RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CCNDBP1O95273 360 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 JUPP14923 745 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 IMPA1P29218 277 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ZNF805Q5CZA5 627 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SPANXN2Q5MJ10 180 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 PRAMEF13Q5VWM6 474 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 FAM109BQ6ICB4 259 aaPredicted RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CASP12Q6UXS9 341 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 OR4M1Q8NGD0 313 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 C7orf34Q96L11 122 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 MAGEB10Q96LZ2 347 aaPredicted RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CENPXA8MT69 81 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 RPLP0P05388 317 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ARPC4P59998 168 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 KCNJ10P78508 379 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 FADDQ13158 208 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SMU1Q2TAY7 513 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 KLHL12Q53G59 568 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SLC35F1Q5T1Q4 408 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 TRIM40Q6P9F5 258 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 POMZP3Q6PJE2 187 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 CCDC190Q86UF4 302 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 SYT14Q8NB59 555 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 OR8K5Q8NH50 307 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 ALG14Q96F25 216 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 GIMAP4Q9NUV9 329 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 TRPS1Q9UHF7 1281 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 MRPS7Q9Y2R9 242 aaKnown RBP8.12□□□□□ -1.11
RPAIN-215ENST00000575112 OR51B4Q9Y5P0 310 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 V9GYH0 126 aa8.12□□□□□ -1.11
RPAIN-215ENST00000575112 PLXND1Q9Y4D7 1925 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 CACNA1GO43497 2377 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 CLCA1A8K7I4 914 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 FAM220BPB1ANY3 271 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 TLX2O43763 284 aaPredicted RBP8.11□□□□□ -1.11
RPAIN-215ENST00000575112 PRKNO60260 465 aaPredicted RBP8.11□□□□□ -1.11
RPAIN-215ENST00000575112 FZD6O60353 706 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 RASGRP1O95267 797 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 CDK1P06493 297 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 FPR1P21462 350 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 GDI1P31150 447 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 MRPL19P49406 292 aaKnown RBP8.11□□□□□ -1.11
RPAIN-215ENST00000575112 LIMK1P53667 647 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 ZNF385BQ569K4 471 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 SYCE2Q6PIF2 218 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 BRAT1Q6PJG6 821 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 ATCAYQ86WG3 371 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 AMER2Q8N7J2 671 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 TCEANCQ8N8B7 351 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 OR9Q1Q8NGQ5 310 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 C1GALT1C1Q96EU7 318 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 MAP6Q96JE9 813 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 OR4K3Q96R72 315 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 FAM129BQ96TA1 746 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 LGR4Q9BXB1 951 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 TM9SF3Q9HD45 589 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 ADAP2Q9NPF8 381 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 IRAK3Q9Y616 596 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 A0A1B0GVC2 190 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 ABHD14A-ACY1A0A1B0GW23 586 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 ISPDA4D126 451 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 A6NIN4 97 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 PLD2O14939 933 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 CTSAP10619 480 aa8.11□□□□□ -1.11
RPAIN-215ENST00000575112 NCBP2P52298 156 aaKnown RBP eCLIP8.11□□□□□ -1.113e-8■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms