RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	RNH1	P13489	461 aa	Known RBP	13.48	□□□□□ -0.25
ABR-223	ENST00000573895	NCF2	P19878	526 aa	Predicted RBP	13.48	□□□□□ -0.25
ABR-223	ENST00000573895	TSFM	P43897	325 aa	Known RBP	13.48	□□□□□ -0.25
ABR-223	ENST00000573895	ATP4B	P51164	291 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	RAB8A	P61006	207 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	ACSM2A	Q08AH3	577 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	KIAA0040	Q15053	153 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	NSDHL	Q15738	373 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	EXT1	Q16394	746 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	TOR1AIP1	Q5JTV8	583 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.48	□□□□□ -0.25
ABR-223	ENST00000573895	ACSM2B	Q68CK6	577 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	GALNT18	Q6P9A2	607 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	PAGE2	Q7Z2X7	111 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	ANKRD37	Q7Z713	158 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	METTL4	Q8N3J2	472 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	OR2L5	Q8NG80	312 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	M1AP	Q8TC57	530 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	BRIX1	Q8TDN6	353 aa	Known RBP	13.48	□□□□□ -0.25
ABR-223	ENST00000573895	HAS2	Q92819	552 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	MS4A6E	Q96DS6	147 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	LRRC37B	Q96QE4	947 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	HBEGF	Q99075	208 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	AICDA	Q9GZX7	198 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	RNF32	Q9H0A6	362 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	KLHL31	Q9H511	634 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	TMEM45A	Q9NWC5	275 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	NOP53	Q9NZM5	478 aa	Known RBP	13.48	□□□□□ -0.25
ABR-223	ENST00000573895	ADAM29	Q9UKF5	820 aa		13.48	□□□□□ -0.25
ABR-223	ENST00000573895	WBP11	Q9Y2W2	641 aa	Known RBP	13.48	□□□□□ -0.25
ABR-223	ENST00000573895	HIVEP3	Q5T1R4	2406 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	SYNDIG1L	A6NDD5	238 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895		E9PBE3	544 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	PSMD12	O00232	456 aa	Predicted RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	CDK2AP1	O14519	115 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	SLC22A2	O15244	555 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	TBX6	O95947	436 aa	Predicted RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	PRPS2	P11908	318 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	IDO1	P14902	403 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	HNRNPH1	P31943	449 aa	Known RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	MRPL19	P49406	292 aa	Known RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	TBL3	Q12788	808 aa	Known RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	RPS6KA2	Q15349	733 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	TLR1	Q15399	786 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	GALNTL6	Q49A17	601 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	RFTN2	Q52LD8	501 aa	Predicted RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	ADNP2	Q6IQ32	1131 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	H3F3C	Q6NXT2	135 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	LANCL3	Q6ZV70	420 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	MTDH	Q86UE4	582 aa	Known RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	SHISA5	Q8N114	240 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	CPSF7	Q8N684	471 aa	Known RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	FNDC5	Q8NAU1	212 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	DNAJB14	Q8TBM8	379 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	ADAMTS18	Q8TE60	1221 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	C11orf24	Q96F05	449 aa	Predicted RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	FCRL1	Q96LA6	429 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	F2RL3	Q96RI0	385 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	LPAR4	Q99677	370 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	BARD1	Q99728	777 aa	Known RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	TBCD	Q9BTW9	1192 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	ROGDI	Q9GZN7	287 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	REXO4	Q9GZR2	422 aa	Known RBP	13.47	□□□□□ -0.25
ABR-223	ENST00000573895	OR51B5	Q9H339	312 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	TEKT2	Q9UIF3	430 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	VPS4A	Q9UN37	437 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	PCDHGA10	Q9Y5H3	936 aa		13.47	□□□□□ -0.25
ABR-223	ENST00000573895	POLE	Q07864	2286 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	C4orf51	C9J302	202 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	ERI3	O43414	337 aa	Known RBP	13.46	□□□□□ -0.25
ABR-223	ENST00000573895	PRMT3	O60678	531 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	DNAJB6	O75190	326 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	CDC123	O75794	336 aa	Predicted RBP	13.46	□□□□□ -0.25
ABR-223	ENST00000573895	ETHE1	O95571	254 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	B3GALT4	O96024	378 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	ITGAM	P11215	1152 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	GSTM5	P46439	218 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	RAP1GDS1	P52306	607 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	STX1B	P61266	288 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	OLR1	P78380	273 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	BTN3A2	P78410	334 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	ZNF169	Q14929	603 aa	Predicted RBP	13.46	□□□□□ -0.25
ABR-223	ENST00000573895	SFT2D3	Q587I9	215 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	IL23R	Q5VWK5	629 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	FAM219B	Q5XKK7	198 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	OR4C11	Q6IEV9	310 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	NOXRED1	Q6NXP6	359 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	RPUSD3	Q6P087	351 aa	Known RBP	13.46	□□□□□ -0.25
ABR-223	ENST00000573895	TRIM40	Q6P9F5	258 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	ABHD17C	Q6PCB6	329 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	CA13	Q8N1Q1	262 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	RNF175	Q8N4F7	328 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	SNRNP40	Q96DI7	357 aa	Known RBP	13.46	□□□□□ -0.25
ABR-223	ENST00000573895	APIP	Q96GX9	242 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	KCNC2	Q96PR1	638 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	SERINC2	Q96SA4	455 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	MYLK2	Q9H1R3	596 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	MMP25	Q9NPA2	562 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	PRDM9	Q9NQV7	894 aa		13.46	□□□□□ -0.25
ABR-223	ENST00000573895	SAR1A	Q9NR31	198 aa		13.46	□□□□□ -0.25

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