RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 GBAP04062 536 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 FAM58BPP0C7Q3 252 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 CNTFP26441 200 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 NEK2P51955 445 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ARFIP1P53367 373 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 PPIAP62937 165 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 HERVK_113P63132 956 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ERVK-8P63133 956 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 IGLV3-21P80748 117 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 BIKQ13323 160 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ZNF267Q14586 743 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ZNF630Q2M218 657 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 GLE1Q53GS7 698 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 CMPK2Q5EBM0 449 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 TEX35Q5T0J7 233 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 METTL2BQ6P1Q9 378 aaKnown RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ARHGAP11AQ6P4F7 1023 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 RNF111Q6ZNA4 994 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 GDF7Q7Z4P5 450 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 DOLPP1Q86YN1 238 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 RELL1Q8IUW5 271 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 LURAP1LQ8IV03 231 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 MCEMP1Q8IX19 187 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 C9orf40Q8IXQ3 194 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ST13P4Q8IZP2 240 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 L3MBTL4Q8NA19 623 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 OR52B6Q8NGF0 335 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 OR52N2Q8NGI0 321 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 C16orf52Q8NHV5 167 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 FAM57AQ8TBR7 257 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 WDR20Q8TBZ3 569 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ZNF721Q8TF20 911 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 CA5BP1Q8WTZ4 195 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 SDCCAG3Q96C92 435 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 SENP5Q96HI0 755 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 FBXL20Q96IG2 436 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 GPR78Q96P69 363 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 SERPINI1Q99574 410 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 VKORC1Q9BQB6 163 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 FAM173AQ9BQD7 235 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ERVK-6Q9BXR3 956 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 TTTY12Q9BZ98 90 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ELOVL6Q9H5J4 265 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 EXO5Q9H790 373 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 SEMA4BQ9NPR2 832 aaPredicted RBP8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 DEPPQ9NTK1 212 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 PCTPQ9UKL6 214 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ERVK-19Q9WJR5 959 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 TSC22D4Q9Y3Q8 395 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 ABCA12Q86UK0 2595 aa8.94□□□□□ -0.98
NPLOC4-212ENST00000573328 A0A0A6YYD5 115 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 PINLYPA6NC86 204 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 ENO4A6NNW6 628 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 STX16-NPEPL1H3BU86 382 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 KIF2AO00139 706 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 HRKO00198 91 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 OR7A17O14581 309 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 STX16O14662 325 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 PROM1O43490 865 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 TMPRSS11DO60235 418 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 AIFM1O95831 613 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 CCL3P10147 92 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 COL6A2P12110 1019 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 AGAP20933 346 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 CNR1P21554 472 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 PIK3R1P27986 724 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 TNFRSF8P28908 595 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 BSGP35613 385 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 MAGEA12P43365 314 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 DNASE1L1P49184 302 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 KCNJ2P63252 427 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 CUL3Q13618 768 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 SGO1Q5FBB7 561 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 NDUFAF5Q5TEU4 345 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 FRG2Q64ET8 278 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 OR52E8Q6IFG1 317 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 DGAT2L6Q6ZPD8 337 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 RPS27LQ71UM5 84 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 PAGE2Q7Z2X7 111 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 FGD2Q7Z6J4 655 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 MILR1Q7Z6M3 343 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 TICAM1Q8IUC6 712 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 GOLM1Q8NBJ4 401 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 FAM13CQ8NE31 585 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 NUBPLQ8TB37 319 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 PHF10Q8WUB8 498 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 DCAKDQ8WVC6 231 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 RIT1Q92963 219 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 ISL2Q96A47 359 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 SGCZQ96LD1 299 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 NSUN5Q96P11 429 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 FRG2BQ96QU4 278 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 MRPL57Q9BQC6 102 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 FUT8Q9BYC5 575 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 MRPL46Q9H2W6 279 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 TP63Q9H3D4 680 aaPredicted RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 LDAHQ9H6V9 325 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 DDX31Q9H8H2 851 aaKnown RBP8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 AHSPQ9NZD4 102 aa8.93□□□□□ -0.98
NPLOC4-212ENST00000573328 INTS1Q8N201 2190 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms