RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 KIAA1143Q96AT1 154 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 C1GALT1C1Q96EU7 318 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 FNDC11Q9BVV2 318 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 CXorf36Q9H7Y0 433 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 RNF121Q9H920 327 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 TXNL4BQ9NX01 149 aaKnown RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 NDOR1Q9UHB4 597 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 CACNB4O00305 520 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 WWP2O00308 870 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 SCO2O43819 266 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 SLC28A2O43868 658 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 ELFN1P0C7U0 828 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 CXCR2P25025 360 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 PPP2R1BP30154 601 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 PUM1Q14671 1186 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 C22orf42Q6IC83 251 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 TRMT11Q7Z4G4 463 aaKnown RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 CFAP206Q8IYR0 622 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 HORMAD2Q8N7B1 307 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 SLC38A5Q8WUX1 472 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 NEURL3Q96EH8 262 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 SAMD11Q96NU1 681 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 QRFPRQ96P65 431 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 FAM83CQ9BQN1 747 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 WASH3PC4AMC7 463 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 NEDD8-MDP1E9PL57 170 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 PI15O43692 258 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 MMP20O60882 483 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 EFEMP2O95967 443 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 IL12RB1P42701 662 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 MAPK12P53778 367 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 RPS26P62854 115 aaKnown RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 MEF2AQ02078 507 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 COX10Q12887 443 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 ATAT1Q5SQI0 421 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 TMIGD1Q6UXZ0 262 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 TRAPPC5Q8IUR0 188 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 PEX5LQ8IYB4 626 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 OR2A12Q8NGT7 310 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM203Q969S6 136 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 POLDIP3Q9BY77 421 aaKnown RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 NUFIP1Q9UHK0 495 aaKnown RBP10.23□□□□□ -0.77
CCDC40-207ENST00000572253 SLC9A8Q9Y2E8 581 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 ANAPC1Q9H1A4 1944 aa10.23□□□□□ -0.77
CCDC40-207ENST00000572253 FFAR1O14842 300 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 NPC1O15118 1278 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 LEFTY1O75610 366 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 HBQ1P09105 142 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 MLLT3P42568 568 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 ALDH6A1Q02252 535 aaKnown RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 GPNMBQ14956 572 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 CLPPQ16740 277 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 PGBD2Q6P3X8 592 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF354BQ96LW1 612 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SGPP1Q9BX95 441 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 MAFFQ9ULX9 164 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 ICKQ9UPZ9 632 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 DNAH12Q6ZR08 3092 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 HOXD10P28358 340 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SLAMF1Q13291 335 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 GINS1Q14691 196 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SEC23BQ15437 767 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SNAPC1Q16533 368 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 CRTC2Q53ET0 693 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SAXO2Q658L1 398 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 TCTN3Q6NUS6 607 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 GAREM2Q75VX8 874 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SZRD1Q7Z422 152 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 FAM26EQ8N5C1 309 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 CREB3L4Q8TEY5 395 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 UFD1Q92890 307 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 RAB8BQ92930 207 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 MSLNLQ96KJ4 702 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 PRRG3Q9BZD7 231 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 C11orf54Q9H0W9 315 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 RNF186Q9NXI6 227 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 TAAR2Q9P1P5 351 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 NOTOA8MTQ0 251 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 IGFBP1P08833 259 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 PRKAR1AP10644 381 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 ACADMP11310 421 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 TIMP2P16035 220 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 CPEP16870 476 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 GNG2P59768 71 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 RACK1P63244 317 aaKnown RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SLC35F1Q5T1Q4 408 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 TYW3Q6IPR3 259 aaKnown RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 RDH10Q8IZV5 341 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 FAM181AQ8N9Y4 354 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SETD7Q8WTS6 366 aaKnown RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 AUTS2Q8WXX7 1259 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF689Q96CS4 500 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 SPATA5L1Q9BVQ7 753 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 RANGRFQ9HD47 186 aaPredicted RBP10.22□□□□□ -0.77
CCDC40-207ENST00000572253 TOR4AQ9NXH8 423 aa10.22□□□□□ -0.77
CCDC40-207ENST00000572253 HCN1O60741 890 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 CSF3P09919 207 aa10.21□□□□□ -0.77
CCDC40-207ENST00000572253 DDCP20711 480 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 284.3 ms