RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 NRSN2Q9GZP1 204 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF385DQ9H6B1 395 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 NDE1Q9NXR1 346 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 DLL3Q9NYJ7 618 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 FOXJ2Q9P0K8 574 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 C5AR2Q9P296 337 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 CTSFQ9UBX1 484 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 C19orf25Q9UFG5 118 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ATP6V1HQ9UI12 483 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 TAGLN3Q9UI15 199 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 LEF1Q9UJU2 399 aaPredicted RBP6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 NDUFAF1Q9Y375 327 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MMACHCQ9Y4U1 282 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 ASB4Q9Y574 426 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 PCDHGA7Q9Y5G6 932 aa6.2□□□□□ -1.42
CTDNEP1-204ENST00000570484 MYO15AQ9UKN7 3530 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 LOC100653049A0A140TA62 436 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 CCT8L1PA6NM43 557 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 C9orf172C9J069 976 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 RFXANKO14593 260 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ANKRD28O15084 1053 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 RAD1O60671 282 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 HNRNPCL1O60812 293 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 LDB3O75112 727 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 KRT34O76011 436 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 UBOX5O94941 541 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 KCNH1O95259 989 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 DLGAP3O95886 979 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ALBP02768 609 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ABCB1P08183 1280 aaPredicted RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 CYC1P08574 325 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 COX4I1P13073 169 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZNF28P17035 718 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 CSNK2A2P19784 350 aaPredicted RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 CAPN3P20807 821 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 CALB2P22676 271 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 GRNP28799 593 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC5A2P31639 672 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 MPIP34949 423 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ID4P47928 161 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 RASSF2P50749 326 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 NCBP2P52298 156 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 DGKQP52824 942 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 MANFP55145 182 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 RPS15P62841 145 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 MC1RQ01726 317 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ID2Q02363 134 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 FOLH1Q04609 750 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 TNP2Q05952 138 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 HSPB3Q12988 150 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ART3Q13508 389 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 SERTAD2Q14140 314 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 MAP7Q14244 749 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 KRT72Q14CN4 511 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 UGT8Q16880 541 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 VPS26BQ4G0F5 336 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 COQ5Q5HYK3 327 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM91A1Q658Y4 838 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 REP15Q6BDI9 236 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR4F3Q6IEY1 312 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 FAM198BQ6UWH4 519 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 LRRC69Q6ZNQ3 347 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 QSOX2Q6ZRP7 698 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 DHDDSQ86SQ9 333 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ZC3H7AQ8IWR0 971 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 RIMKLAQ8IXN7 391 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 MMP21Q8N119 569 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 FITM2Q8N6M3 262 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 IL22RA1Q8N6P7 574 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 POU5F2Q8N7G0 328 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 OR8J2Q8NGG1 315 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 DNAJB8Q8NHS0 232 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 STT3BQ8TCJ2 826 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 TSPEARQ8WU66 669 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 VPS33AQ96AX1 596 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 RCN3Q96D15 328 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 VPS50Q96JG6 964 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 HSH2DQ96JZ2 352 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 PTCHD1Q96NR3 888 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 DGAT2Q96PD7 388 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 PANX1Q96RD7 426 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 CCDC106Q9BWC9 280 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 CHST8Q9H2A9 424 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 ACTL8Q9H568 366 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 SOX17Q9H6I2 414 aaPredicted RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 WDR54Q9H977 334 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 SLC35C2Q9NQQ7 365 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 SEMA3GQ9NS98 782 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 GID8Q9NWU2 228 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 PADI1Q9ULC6 663 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 MKL2Q9ULH7 1088 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 VPS4AQ9UN37 437 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 TMEM184BQ9Y519 407 aaPredicted RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 SNX8Q9Y5X2 465 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 SDK1Q7Z5N4 2213 aa6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 TDRD6O60522 2096 aaKnown RBP6.19□□□□□ -1.42
CTDNEP1-204ENST00000570484 GON4LQ3T8J9 2241 aa6.18□□□□□ -1.42
CTDNEP1-204ENST00000570484 C15orf38-AP3S2A0A0A6YYH1 394 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms