RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 OR9A1PQ8NGU1 263 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.58□□□□□ -0.08
USP43-202ENST00000570475 ARSGQ96EG1 525 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 IL36AQ9UHA7 158 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 RPL36Q9Y3U8 105 aaKnown RBP14.58□□□□□ -0.08
USP43-202ENST00000570475 NCR1O76036 304 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 RAB8AP61006 207 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 SLAMF1Q13291 335 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 ZDHHC20Q5W0Z9 365 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 TUBA3EQ6PEY2 450 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 GLCCI1Q86VQ1 547 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 CHTF18Q8WVB6 975 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 IRF7Q92985 503 aa14.58□□□□□ -0.08
USP43-202ENST00000570475 MAGEB10Q96LZ2 347 aaPredicted RBP14.58□□□□□ -0.08
USP43-202ENST00000570475 RANGRFQ9HD47 186 aaPredicted RBP14.58□□□□□ -0.08
USP43-202ENST00000570475 PRAMEF25A6NGN4 478 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 CPSF4LA6NMK7 179 aaKnown RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 H0YIV9 168 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 FURINP09958 794 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 CELP19835 753 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 ZNF91Q05481 1191 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 KLHL12Q53G59 568 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 MSANTD1Q6ZTZ1 278 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 RD3Q7Z3Z2 195 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 C9orf43Q8TAL5 461 aaPredicted RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 TFGQ92734 400 aaPredicted RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 PITX2Q99697 317 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 BHLHE41Q9C0J9 482 aaPredicted RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 RETREG1Q9H6L5 497 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 IL21Q9HBE4 155 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 CUEDC1Q9NWM3 386 aaPredicted RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 CNIH4Q9P003 139 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 PCM1Q15154 2024 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 NRG2O14511 850 aaPredicted RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 SERPINI2O75830 405 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 CCNYL3P0C7X3 344 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 IL1RNP18510 177 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 SRP54P61011 504 aaKnown RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 KCNC4Q03721 635 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 SEC23BQ15437 767 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 ZNF730Q6ZMV8 503 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 KRT74Q7RTS7 529 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 MMAAQ8IVH4 418 aaKnown RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 CCDC116Q8IYX3 515 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 PSD2Q9BQI7 771 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 CACYBPQ9HB71 228 aaKnown RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 SLC16A5O15375 505 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 SDHBP21912 280 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 NCBP2P52298 156 aaKnown RBP eCLIP14.57□□□□□ -0.08
USP43-202ENST00000570475 LIM2P55344 173 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.57□□□□□ -0.08
USP43-202ENST00000570475 MRPL28Q13084 256 aaKnown RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 RAB33AQ14088 237 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 GPNMBQ14956 572 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 UCN3Q969E3 161 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 SLC35B4Q969S0 331 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 GABARAPL3Q9BY60 117 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 ZCCHC2Q9C0B9 1178 aaKnown RBP14.57□□□□□ -0.08
USP43-202ENST00000570475 RHBGQ9H310 441 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 TDP1Q9NUW8 608 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 SLC9A8Q9Y2E8 581 aa14.57□□□□□ -0.08
USP43-202ENST00000570475 C2orf92A0A1B0GVN3 265 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 ARHGEF15O94989 841 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 C1orf105O95561 183 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 CST5P28325 142 aaPredicted RBP14.56□□□□□ -0.08
USP43-202ENST00000570475 IL12RB1P42701 662 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 ZNF750Q32MQ0 723 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 METTL2BQ6P1Q9 378 aaKnown RBP14.56□□□□□ -0.08
USP43-202ENST00000570475 PLPP6Q8IY26 295 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 OR4K5Q8NGD3 323 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 TEX47Q8TBZ9 253 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 WACQ9BTA9 647 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 HOXD1Q9GZZ0 328 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 C1GALT1Q9NS00 363 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 PTGFRNQ9P2B2 879 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 CMAHPQ9Y471 501 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 MEIOCA2RUB1 952 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 GUCY1B2O75343 617 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 CSO75390 466 aaKnown RBP14.56□□□□□ -0.08
USP43-202ENST00000570475 IL7P13232 177 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 DDX5P17844 614 aaKnown RBP14.56□□□□□ -0.08
USP43-202ENST00000570475 IFNA8P32881 189 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 PNLIPRP1P54315 467 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 TAP2Q03519 686 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 ARHGAP15Q53QZ3 475 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 SLC35F1Q5T1Q4 408 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 DDI2Q5TDH0 399 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 NXPE4Q6UWF7 544 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 TSEN54Q7Z6J9 526 aaKnown RBP14.56□□□□□ -0.08
USP43-202ENST00000570475 ATP6V1C2Q8NEY4 427 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 NLGN4YQ8NFZ3 816 aaPredicted RBP14.56□□□□□ -0.08
USP43-202ENST00000570475 TXNDC15Q96J42 360 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 TEFMQ96QE5 360 aaKnown RBP14.56□□□□□ -0.08
USP43-202ENST00000570475 FERD3LQ96RJ6 166 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 NELL2Q99435 816 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 EGLN3Q9H6Z9 239 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 MVB12BQ9H7P6 319 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 TM7SF3Q9NS93 570 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 SNX7Q9UNH6 387 aa14.56□□□□□ -0.08
USP43-202ENST00000570475 GSTK1Q9Y2Q3 226 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms