RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 PIGTQ969N2 578 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 ISL2Q96A47 359 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 ANKRD9Q96BM1 317 aaPredicted RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 CERS2Q96G23 380 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 FBXL20Q96IG2 436 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 ART5Q96L15 291 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 Q96MF0 132 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 TRIB1Q96RU8 372 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 WDR83Q9BRX9 315 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 BDH2Q9BUT1 245 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 RBM24Q9BX46 236 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 CAPS2Q9BXY5 557 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 PRDM7Q9NQW5 492 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.82□□□□□ -0.682e-6■■■■■ 29.4
GTF3C1-209ENST00000568569 GPRC5BQ9NZH0 403 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 SLC17A6Q9P2U8 582 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 CNOT11Q9UKZ1 510 aaKnown RBP10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 OARD1Q9Y530 152 aa10.82□□□□□ -0.68
GTF3C1-209ENST00000568569 RTTNQ86VV8 2226 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 SH3D21A4FU49 640 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 ANKRD33BA6NCL7 494 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 CDC7O00311 574 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 CASKO14936 926 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 TRIM3O75382 744 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 ERN1O75460 977 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 CXCR5P32302 372 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 RPL21P46778 160 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 SLC6A12P48065 614 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 CDK9P50750 372 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 PLIN5Q00G26 463 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 NTRK2Q16620 822 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 VASNQ6EMK4 673 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 ADNP2Q6IQ32 1131 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 SYDE1Q6ZW31 735 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 FRA10AC1Q70Z53 315 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 SLC29A4Q7RTT9 530 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 ADAMTSL2Q86TH1 951 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 SRFBP1Q8NEF9 429 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 MAGOHBQ96A72 148 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 RHBDF1Q96CC6 855 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 RBM18Q96H35 190 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 F2RL3Q96RI0 385 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 GAL3ST4Q96RP7 486 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 MAPKAP1Q9BPZ7 522 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 NAT9Q9BTE0 207 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 EHD1Q9H4M9 534 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 CALHM2Q9HA72 323 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 PPANQ9NQ55 473 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 EIF3LQ9Y262 564 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 IKBKGQ9Y6K9 419 aa10.81□□□□□ -0.68
GTF3C1-209ENST00000568569 ARHGAP21Q5T5U3 1957 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 IQANK1A0A1B0GTG1 560 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 INAFM1C9JVW0 142 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 SMAD7O15105 426 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 FGF17O60258 216 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 SNX4O95219 450 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 LRATO95237 230 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 HPNP05981 417 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 TMIGD3P0DMS9 266 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 CPA2P48052 419 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 IGLV3-21P80748 117 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 BIKQ13323 160 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 RCAN2Q14206 197 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 C18orf21Q32NC0 220 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 NHSL2Q5HYW2 709 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 TEDDM1Q5T9Z0 273 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 ZNF793Q6ZN11 406 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 YTHDF3Q7Z739 585 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 NKAPQ8N5F7 415 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 ACOT4Q8N9L9 421 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 DIO2Q92813 273 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 NTNG2Q96CW9 530 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 TBCDQ9BTW9 1192 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 SFXN3Q9BWM7 321 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 WWTR1Q9GZV5 400 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 UBQLN3Q9H347 655 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 GALNT8Q9NY28 637 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 C15orf41Q9Y2V0 281 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 SLC6A5Q9Y345 797 aa10.8□□□□□ -0.68
GTF3C1-209ENST00000568569 EML6Q6ZMW3 1958 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 CAPN14A8MX76 684 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 HRKO00198 91 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 TP53I11O14683 189 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 CLGNO14967 610 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 SCELO95171 688 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 ACSL3O95573 720 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 BMP7P18075 431 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 HIST1H1TP22492 207 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 CPN2P22792 545 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 ATP5A1P25705 553 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 MASP1P48740 699 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 EBPQ15125 230 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 RPS6KA2Q15349 733 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 TOMM20Q15388 145 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 TSNQ15631 228 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 TMEM35AQ53FP2 167 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 PAGE2BQ5JRK9 111 aa10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 CCDC137Q6PK04 289 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-209ENST00000568569 RNF111Q6ZNA4 994 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms