RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TMEM64Q6YI46 380 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 Q6ZS52 159 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 Q7L0L9 218 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 SZRD1Q7Z422 152 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 TRIM73Q86UV7 250 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 SPARTQ8N0X7 666 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 OR10G2Q8NGC3 310 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 OR52J3Q8NH60 311 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 GAL3ST3Q96A11 431 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 CNRIP1Q96F85 164 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-211ENST00000568373 FEVQ99581 238 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 PITX2Q99697 317 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 FANCEQ9HB96 536 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 POLMQ9NP87 494 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-211ENST00000568373 ZCCHC3Q9NUD5 404 aaKnown RBP17.15■□□□□ 0.34
SMPD3-211ENST00000568373 CES1P1Q9UKY3 287 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 CDC14AQ9UNH5 594 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 FAM32AQ9Y421 112 aaKnown RBP17.15■□□□□ 0.34
SMPD3-211ENST00000568373 ZNF451Q9Y4E5 1061 aa17.15■□□□□ 0.34
SMPD3-211ENST00000568373 J3KTA2 159 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 MFN2O95140 757 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 IFNW1P05000 195 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 RHCEP18577 417 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 POU3F3P20264 500 aaPredicted RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 CD247P20963 164 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 CCR5P51681 352 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 RGS1Q08116 209 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 GPR18Q14330 331 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 MICAQ29983 383 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 SLC48A1Q6P1K1 146 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF605Q86T29 641 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 ASPGQ86U10 573 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 ERI1Q8IV48 349 aaKnown RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 TRIM48Q8IWZ4 208 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 SLC5A8Q8N695 610 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 KCT2Q8NC54 265 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 BPIFB6Q8NFQ5 453 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF420Q8TAQ5 688 aaPredicted RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 SUN3Q8TAQ9 357 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 NT5CQ8TCD5 201 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 APOBEC4Q8WW27 367 aaKnown RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 SEMA3GQ9NS98 782 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 P2RX2Q9UBL9 471 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 ENTPD4Q9Y227 616 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 TRIOO75962 3097 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 A0A1W2PPC1 479 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 PROM1O43490 865 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 TNFSF14O43557 240 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 TNFP01375 233 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 UGT2B7P16662 529 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 MAGP20916 626 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 DCKP27707 260 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 HMGA2P52926 109 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 RPP38P78345 283 aaKnown RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 BTN3A2P78410 334 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 PUM1Q14671 1186 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 EXOC3L2Q2M3D2 409 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 KIAA0895LQ68EN5 471 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 FBXO42Q6P3S6 717 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 B3GNT8Q7Z7M8 397 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 LGI4Q8N135 537 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 OR13F1Q8NGS4 319 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 GPBAR1Q8TDU6 330 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 CNDP2Q96KP4 475 aaKnown RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 OR51I1Q9H343 314 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 ACER3Q9NUN7 267 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 PAK1IP1Q9NWT1 392 aaPredicted RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 LYARQ9NX58 379 aaKnown RBP17.14■□□□□ 0.33
SMPD3-211ENST00000568373 NAALAD2Q9Y3Q0 740 aa17.14■□□□□ 0.33
SMPD3-211ENST00000568373 NINQ8N4C6 2090 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 TMEM247A6NEH6 219 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 A8MVJ9 347 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 SLC28A2O43868 658 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 SLC35G6P0C7Q6 338 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 OR12D1P0DN82 309 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 ANXA8P13928 327 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 MAGEA8P43361 318 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 LIMS1P48059 325 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 DGKEP52429 567 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 CXCR4P61073 352 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 GPR107Q5VW38 600 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 GPR32P1Q8NGA4 272 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 OR5D16Q8NGK9 328 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 SFXN5Q8TD22 340 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 ZFPM2Q8WW38 1151 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 C12orf43Q96C57 262 aaKnown RBP17.13■□□□□ 0.33
SMPD3-211ENST00000568373 TOE1Q96GM8 510 aaKnown RBP17.13■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF607Q96SK3 696 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 TREX2Q9BQ50 279 aaPredicted RBP17.13■□□□□ 0.33
SMPD3-211ENST00000568373 LIN28AQ9H9Z2 209 aaKnown RBP17.13■□□□□ 0.33
SMPD3-211ENST00000568373 ACTR10Q9NZ32 417 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 CYP8B1Q9UNU6 501 aa17.13■□□□□ 0.33
SMPD3-211ENST00000568373 GSAPA4D1B5 854 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 OR6C74A6NCV1 312 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 PTGES3LE9PB15 166 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 XPNPEP2O43895 674 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 SEC14L2O76054 403 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 VIPP01282 170 aa17.12■□□□□ 0.33
SMPD3-211ENST00000568373 ZNF888P0CJ79 500 aaPredicted RBP17.12■□□□□ 0.33
SMPD3-211ENST00000568373 POLR2CP19387 275 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms