RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 ROGDIQ9GZN7 287 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 RUBCNLQ9H714 662 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 NTN4Q9HB63 628 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SIRT3Q9NTG7 399 aaPredicted RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 TAS2R7Q9NYW3 318 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 DLGAP2Q9P1A6 1054 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 DNAJB9Q9UBS3 223 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 RAB23Q9ULC3 237 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 RAB26Q9ULW5 256 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 DAPP1Q9UN19 280 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 BDP1A6H8Y1 2624 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TMEM131Q92545 1883 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TTC28Q96AY4 2481 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TMEM247A6NEH6 219 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SGK494L7N484 410 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TBX19O60806 448 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 LDB3O75112 727 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 CAPNS1P04632 268 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 FABP3P05413 133 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 OR12D1P0DN82 309 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 OR1E2P47887 323 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SEPHS1P49903 392 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 XKP51811 444 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 ARFIP1P53367 373 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 OR1D5P58170 312 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 MRPS35P82673 323 aaKnown RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 SHC2P98077 582 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 IL1RL1Q01638 556 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 TNFRSF17Q02223 184 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SIGLEC14Q08ET2 396 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 LASP1Q14847 261 aaKnown RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 LAPTM4AQ15012 233 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 GPR19Q15760 415 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 ZIK1Q3SY52 487 aaPredicted RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 RPS26P11Q5JNZ5 115 aaPredicted RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 INTS11Q5TA45 600 aaKnown RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 CBLL1Q75N03 491 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 RNF44Q7L0R7 432 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 EIF3MQ7L2H7 374 aaKnown RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 MCATQ8IVS2 390 aaKnown RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 SLC25A45Q8N413 288 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 NEURL3Q96EH8 262 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SLC35G5Q96KT7 338 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 ZNF597Q96LX8 424 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 RBCK1Q9BYM8 510 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 MAGIXQ9H6Y5 334 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SEMA3GQ9NS98 782 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 PHF11Q9UIL8 331 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 CNOT11Q9UKZ1 510 aaKnown RBP6.67□□□□□ -1.34
SMG1-215ENST00000568239 ANGPT4Q9Y264 503 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SH3GLB1Q9Y371 365 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 RNF215Q9Y6U7 377 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 SPACA6W5XKT8 324 aa6.67□□□□□ -1.34
SMG1-215ENST00000568239 A0A1B0GTW7 788 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 A8MU76 341 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ACOX3O15254 700 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 B4GALT2O60909 372 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CFIP05156 583 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 NELFEP18615 380 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 MATN1P21941 496 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 PRKACGP22612 351 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 MC3RP41968 323 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 FRKP42685 505 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 YAP1P46937 504 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 VLDLRP98155 873 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 RBBP4Q09028 425 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 LTB4RQ15722 352 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ZNF630Q2M218 657 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 ZC3H12BQ5HYM0 836 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 SAXO2Q658L1 398 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 KRT80Q6KB66 452 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 METTL27Q8N6F8 245 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 OR9A4Q8NGU2 314 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SUN3Q8TAQ9 357 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SLC38A5Q8WUX1 472 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ELF4Q99607 663 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 OSBPL11Q9BXB4 747 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 TMEM38AQ9H6F2 299 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SOX17Q9H6I2 414 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 ANKHQ9HCJ1 492 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 OLAHQ9NV23 265 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 SCOCQ9UIL1 159 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 ABCG2Q9UNQ0 655 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 PCDHGB5Q9Y5G0 923 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 A0A0A6YYC8 382 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 IGHV5-51A0A0C4DH38 117 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 MAGEA13PA6NCF6 341 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 LILRA5A6NI73 299 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 FAM227AF5H4B4 570 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 I3L1I5 382 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 SLC28A2O43868 658 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 RDH16O75452 317 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CDC123O75794 336 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 SEC24DO94855 1032 aaPredicted RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 RASAL1O95294 804 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 CLIC3O95833 236 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 HMGN2P05204 90 aaKnown RBP6.66□□□□□ -1.34
SMG1-215ENST00000568239 LYNP07948 512 aa6.66□□□□□ -1.34
SMG1-215ENST00000568239 NR2F1P10589 423 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms