RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 AIFM1O95831 613 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 CLPSP04118 112 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 PHEXP78562 749 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 ADORA2A-AS1P86434 159 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 SLC29A2Q14542 456 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 CDSNQ15517 529 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 GGTA1PQ4G0N0 100 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 CMPK2Q5EBM0 449 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 LETMD1Q6P1Q0 360 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 NCCRP1Q6ZVX7 275 aaPredicted RBP13.57□□□□□ -0.24
FANCA-220ENST00000566409 MILR1Q7Z6M3 343 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 GHDCQ8N2G8 530 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 POGLUT1Q8NBL1 392 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 RBM18Q96H35 190 aaKnown RBP13.57□□□□□ -0.24
FANCA-220ENST00000566409 DGAT2Q96PD7 388 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 SERPINI1Q99574 410 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 MRPL1Q9BYD6 325 aaKnown RBP13.57□□□□□ -0.24
FANCA-220ENST00000566409 TIMMDC1Q9NPL8 285 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 HPF1Q9NWY4 346 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 LYARQ9NX58 379 aaKnown RBP13.57□□□□□ -0.24
FANCA-220ENST00000566409 ERVK-11Q9UQG0 969 aa13.57□□□□□ -0.24
FANCA-220ENST00000566409 NCKAP5O14513 1909 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 G3V3Y1 287 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 ADAM10O14672 748 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 DLX3O60479 287 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 SEMA3DO95025 777 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 MLYCDO95822 493 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 FREM3P0C091 2139 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 NR2F6P10588 404 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 ALOX15P16050 662 aaPredicted RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 TLX1P31314 330 aaPredicted RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 ARL1P40616 181 aaPredicted RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 BUD31P41223 144 aaPredicted RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 ASPHQ12797 758 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 BIKQ13323 160 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 UNC50Q53HI1 259 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 SGO1Q5FBB7 561 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 PIGGQ5H8A4 983 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 CYP20A1Q6UW02 462 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 LYPD8Q6UX82 237 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 MRGPRGQ86SM5 289 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 NUDT13Q86X67 352 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 DOLPP1Q86YN1 238 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 GPALPP1Q8IXQ4 340 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 GSPT2Q8IYD1 628 aaKnown RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 ST13P4Q8IZP2 240 aaPredicted RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 OR52N2Q8NGI0 321 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 OR5L2Q8NGL0 311 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 MZB1Q8WU39 189 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 FBXL20Q96IG2 436 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 MAGED4Q96JG8 741 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 PHF12Q96QT6 1004 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 TEX10Q9NXF1 929 aaPredicted RBP13.56□□□□□ -0.24
FANCA-220ENST00000566409 HRH3Q9Y5N1 445 aa13.56□□□□□ -0.24
FANCA-220ENST00000566409 ARHGAP10A1A4S6 786 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 FOXO6A8MYZ6 492 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 TFECO14948 347 aaPredicted RBP13.55□□□□□ -0.24
FANCA-220ENST00000566409 NADKO95544 446 aaPredicted RBP13.55□□□□□ -0.24
FANCA-220ENST00000566409 PDYNP01213 254 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 KLK1P06870 262 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 COX7A2P14406 83 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 HSD17B3P37058 310 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 HERVK_113P63132 956 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 ERVK-8P63133 956 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 PLIN5Q00G26 463 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 ART3Q13508 389 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 ZNF267Q14586 743 aaPredicted RBP13.55□□□□□ -0.24
FANCA-220ENST00000566409 MPEG1Q2M385 716 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 LGSNQ5TDP6 509 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 SP5Q6BEB4 398 aaPredicted RBP13.55□□□□□ -0.24
FANCA-220ENST00000566409 TTC19Q6DKK2 380 aaPredicted RBP13.55□□□□□ -0.24
FANCA-220ENST00000566409 C3P1Q6ZMU1 363 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 ZNF808Q8N4W9 903 aaPredicted RBP13.55□□□□□ -0.24
FANCA-220ENST00000566409 C7orf57Q8NEG2 295 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 OR2M7Q8NG81 312 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 NUBPLQ8TB37 319 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 TRPC4APQ8TEL6 797 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 MTBPQ96DY7 904 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 ERVK-6Q9BXR3 956 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 PLSCR2Q9NRY7 297 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 SUCOQ9UBS9 1254 aaKnown RBP13.55□□□□□ -0.24
FANCA-220ENST00000566409 COPS7AQ9UBW8 275 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 ERVK-19Q9WJR5 959 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 MEMO1Q9Y316 297 aa13.55□□□□□ -0.24
FANCA-220ENST00000566409 PDZD2O15018 2839 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 A0A1B0GTH9 108 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 PRSS44E7EML9 344 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 GOLGA8RI6L899 631 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 GLSO94925 669 aaPredicted RBP13.54□□□□□ -0.24
FANCA-220ENST00000566409 OR4F21O95013 312 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 OTCP00480 354 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 SLC35E2P0CK97 266 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 CCL3P10147 92 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 SLC37A1P57057 533 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 CLCQ05315 142 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 GALNT1Q10472 559 aaPredicted RBP13.54□□□□□ -0.24
FANCA-220ENST00000566409 TBL3Q12788 808 aaKnown RBP13.54□□□□□ -0.24
FANCA-220ENST00000566409 IFT88Q13099 833 aa13.54□□□□□ -0.24
FANCA-220ENST00000566409 SPRED3Q2MJR0 410 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms