RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 TP53INP1Q96A56 240 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 DGAT2Q96PD7 388 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 TRIM8Q9BZR9 551 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 SACM1LQ9NTJ5 587 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 NINJ2Q9NZG7 142 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 COQ3Q9NZJ6 369 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 CNIH4Q9P003 139 aa14.04□□□□□ -0.16
CMTM3-212ENST00000566121 CELSR1Q9NYQ6 3014 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 WWP2O00308 870 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 HCN1O60741 890 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 IGFBP2P18065 325 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 ELAVL4P26378 380 aaKnown RBP14.03□□□□□ -0.16
CMTM3-212ENST00000566121 GMPRP36959 345 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 RPS13P62277 151 aaKnown RBP14.03□□□□□ -0.16
CMTM3-212ENST00000566121 PPIAP62937 165 aaKnown RBP14.03□□□□□ -0.16
CMTM3-212ENST00000566121 IRF9Q00978 393 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 FOLH1Q04609 750 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 EMC4Q5J8M3 183 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 LYPD8Q6UX82 237 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 GOLGA7Q7Z5G4 137 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 ZNF295-AS1Q8N0V1 137 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 FAM109AQ8N4B1 249 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 ZNF321PQ8N8H1 164 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 MNS1Q8NEH6 495 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 C17orf47Q8NEP4 570 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 OR52N2Q8NGI0 321 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 SLC22A8Q8TCC7 542 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 EXT2Q93063 718 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 SECISBP2Q96T21 854 aaKnown RBP14.03□□□□□ -0.16
CMTM3-212ENST00000566121 MTERF1Q99551 399 aaKnown RBP14.03□□□□□ -0.16
CMTM3-212ENST00000566121 TTTY12Q9BZ98 90 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 AHSPQ9NZD4 102 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 SH3BGRL2Q9UJC5 107 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 HRH3Q9Y5N1 445 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 HIVEP1P15822 2718 aa14.03□□□□□ -0.16
CMTM3-212ENST00000566121 AQP7O14520 342 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 ZNF354AO60765 605 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-212ENST00000566121 KRT38O76015 456 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 NADKO95544 446 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-212ENST00000566121 FBXO45P0C2W1 286 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 FAM58BPP0C7Q3 252 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 CHRNB4P30926 498 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 RAP1GDS1P52306 607 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 HNRNPH2P55795 449 aaKnown RBP14.02□□□□□ -0.17
CMTM3-212ENST00000566121 SLC37A1P57057 533 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 HSF1Q00613 529 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 SLC7A5Q01650 507 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 SLC22A10Q63ZE4 541 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 FRG2Q64ET8 278 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 TIFABQ6ZNK6 161 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 C16orf47Q6ZP98 133 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-212ENST00000566121 TRILQ7L0X0 811 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 TAOK1Q7L7X3 1001 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 NUDT13Q86X67 352 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 C9orf40Q8IXQ3 194 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 ZNF441Q8N8Z8 693 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 NTNG2Q96CW9 530 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 FRG2BQ96QU4 278 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 MRPL57Q9BQC6 102 aaKnown RBP14.02□□□□□ -0.17
CMTM3-212ENST00000566121 WDR41Q9HAD4 459 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 SLC24A3Q9HC58 644 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 ACKR4Q9NPB9 350 aa14.02□□□□□ -0.17
CMTM3-212ENST00000566121 ANKHD1Q8IWZ3 2542 aaKnown RBP14.02□□□□□ -0.17
CMTM3-212ENST00000566121 ANKRD17O75179 2603 aaKnown RBP14.01□□□□□ -0.17
CMTM3-212ENST00000566121 A0A1W2PR48 441 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 ESYT3A0FGR9 886 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 PINLYPA6NC86 204 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 OR7A17O14581 309 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 P04436 131 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 INHBAP08476 426 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 SERPINB3P29508 390 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 KIR3DL1P43629 444 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 GPR85P60893 370 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 FUT7Q11130 342 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 SLC10A1Q14973 349 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 CDSNQ15517 529 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 NTRK2Q16620 822 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 CPSF6Q16630 551 aaKnown RBP eCLIP14.01□□□□□ -0.17
CMTM3-212ENST00000566121 ZNF750Q32MQ0 723 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 GXYLT1Q4G148 440 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 TBCELQ5QJ74 424 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 ADGRD1Q6QNK2 874 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 PAGE2Q7Z2X7 111 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 CD163Q86VB7 1156 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 PLD6Q8N2A8 252 aaKnown RBP14.01□□□□□ -0.17
CMTM3-212ENST00000566121 TMEM151AQ8N4L1 468 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 CA5BP1Q8WTZ4 195 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 RND1Q92730 232 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 RIT1Q92963 219 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 SPACA9Q96E40 222 aaPredicted RBP14.01□□□□□ -0.17
CMTM3-212ENST00000566121 DMGDHQ9UI17 866 aaKnown RBP14.01□□□□□ -0.17
CMTM3-212ENST00000566121 PCTPQ9UKL6 214 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 RNF11Q9Y3C5 154 aa14.01□□□□□ -0.17
CMTM3-212ENST00000566121 PHF3Q92576 2039 aaKnown RBP14□□□□□ -0.17
CMTM3-212ENST00000566121 IQANK1A0A1B0GTG1 560 aa14□□□□□ -0.17
CMTM3-212ENST00000566121 CAPN14A8MX76 684 aa14□□□□□ -0.17
CMTM3-212ENST00000566121 FOXO6A8MYZ6 492 aa14□□□□□ -0.17
CMTM3-212ENST00000566121 FAM47E-STBD1D6RA91 191 aa14□□□□□ -0.17
CMTM3-212ENST00000566121 SAP18O00422 153 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms