RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 C16orf78Q8WTQ4 265 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 TANKQ92844 425 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 TAS2R7Q9NYW3 318 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 GIMAP2Q9UG22 337 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 IL17BQ9UHF5 180 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 CES1P1Q9UKY3 287 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 RAB26Q9ULW5 256 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 EXO1Q9UQ84 846 aaKnown RBP11.87□□□□□ -0.51
SF3B3-206ENST00000565990 DLGAP4Q9Y2H0 992 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 CLDN16Q9Y5I7 305 aa11.87□□□□□ -0.51
SF3B3-206ENST00000565990 SMIM31A0A1B0GVY4 71 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 ARHGAP10A1A4S6 786 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 TMEM8BA6NDV4 472 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 DENRO43583 198 aaKnown RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 JRKO75564 520 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 UMODP07911 640 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 DRD2P14416 443 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 LIFP15018 202 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 SDC1P18827 310 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 CPN2P22792 545 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 JAK1P23458 1154 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 TACR1P25103 407 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 MAPK1P28482 360 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 TLX1P31314 330 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 ROR2Q01974 943 aaKnown RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 RHAGQ02094 409 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 TNFRSF17Q02223 184 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 ZNF763Q0D2J5 394 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 MAD2L1Q13257 205 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 BIKQ13323 160 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 LSM12Q3MHD2 195 aaKnown RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 IL23RQ5VWK5 629 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 FAM71E1Q6IPT2 247 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 TMEM205Q6UW68 189 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 QSOX2Q6ZRP7 698 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 IKBIPQ70UQ0 350 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 SPATA19Q7Z5L4 167 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 TMEM151BQ8IW70 566 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 KBTBD2Q8IY47 623 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 ALDH16A1Q8IZ83 802 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 PQLC1Q8N2U9 271 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 GOLM1Q8NBJ4 401 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 C7orf57Q8NEG2 295 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 KCNE4Q8WWG9 221 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 UCN3Q969E3 161 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 DUS3LQ96G46 650 aaKnown RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 EGLN2Q96KS0 407 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 PPP1R36Q96LQ0 422 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 OR52B2Q96RD2 323 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 CSF3RQ99062 836 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 YIPF2Q9BWQ6 316 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 RPF2Q9H7B2 306 aaKnown RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 PRM3Q9NNZ6 103 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 MYNNQ9NPC7 610 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 SEMA3GQ9NS98 782 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 FBXW2Q9UKT8 454 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 PADI2Q9Y2J8 665 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 MMACHCQ9Y4U1 282 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 PCDHA9Q9Y5H5 950 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 SPACA6W5XKT8 324 aa11.86□□□□□ -0.51
SF3B3-206ENST00000565990 URB1O60287 2271 aaKnown RBP11.86□□□□□ -0.51
SF3B3-206ENST00000565990 IGKV3D-11A0A0A0MRZ8 115 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 GNG14A0A1W2PPG7 69 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 C1orf226A1L170 272 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 WASHC1A8K0Z3 465 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 CLDN4O14493 209 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 PCDH17O14917 1159 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 PGRMC2O15173 223 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 TBX19O60806 448 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 CREG1O75629 220 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 BAG2O95816 211 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 IGHEP01854 428 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 ME2P23368 584 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 BUD31P41223 144 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 HNRNPFP52597 415 aaKnown RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 EMP2P54851 167 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 C21orf58P58505 322 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 TAS2R50P59544 299 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 RPL38P63173 70 aaKnown RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 BTG2P78543 158 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 IGLV3-21P80748 117 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 TRAP1Q12931 704 aaKnown RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 STX5Q13190 355 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 SQLEQ14534 574 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 HEPACAMQ14CZ8 416 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 ADRM1Q16186 407 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 PIGGQ5H8A4 983 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 NDUFAF5Q5TEU4 345 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 PROSER1Q86XN7 944 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 MARVELD2Q8N4S9 558 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 FNDC5Q8NAU1 212 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 ICA1LQ8NDH6 482 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 DNAJB14Q8TBM8 379 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 SLC26A7Q8TE54 656 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 ADAMTS17Q8TE56 1095 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 KIAA1143Q96AT1 154 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 ANKRD9Q96BM1 317 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 ZNF764Q96H86 408 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-206ENST00000565990 SLC45A3Q96JT2 553 aa11.85□□□□□ -0.51
SF3B3-206ENST00000565990 CLPTM1LQ96KA5 538 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms