RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ATXN8OSP0DMR3 200 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 TCN1P20061 433 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-213ENST00000565834 PPIBP23284 216 aaKnown RBP17.64■□□□□ 0.41
COMMD4-213ENST00000565834 PPP2R1BP30154 601 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 GPC1P35052 558 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 XCR1P46094 333 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 MC2RQ01718 297 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 FOLH1Q04609 750 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 LIPEQ05469 1076 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 C6orf163Q5TEZ5 329 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 CDCP2Q5VXM1 449 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 OR4N5Q8IXE1 308 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 ZNF595Q8IYB9 648 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 CCDC116Q8IYX3 515 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 LRRC25Q8N386 305 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-213ENST00000565834 DEFB124Q8NES8 71 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 SUN3Q8TAQ9 357 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-213ENST00000565834 TBC1D20Q96BZ9 403 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 ECSITQ9BQ95 431 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 SLC35A5Q9BS91 424 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 YIPF2Q9BWQ6 316 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 ALG2Q9H553 416 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 CXorf36Q9H7Y0 433 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 TPT1P8Q9HAU6 139 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 MAP4K5Q9Y4K4 846 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 SNX8Q9Y5X2 465 aa17.64■□□□□ 0.41
COMMD4-213ENST00000565834 FGF17O60258 216 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 DNAJA2O60884 412 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 GPR75O95800 540 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 HSD17B1P14061 328 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 LIMK1P53667 647 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 DUSP2Q05923 314 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 ARHGAP40Q5TG30 622 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 C1orf146Q5VVC0 180 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 FAM156AQ8NDB6 213 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 PSMA8Q8TAA3 256 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 ZFP90Q8TF47 636 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 CLIP3Q96DZ5 547 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 CTRCQ99895 268 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 TRIM4Q9C037 500 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 FBXO8Q9NRD0 319 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 TRPC4Q9UBN4 977 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 SUCOQ9UBS9 1254 aaKnown RBP17.63■□□□□ 0.41
COMMD4-213ENST00000565834 CORO2BQ9UQ03 480 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 POMPQ9Y244 141 aa17.63■□□□□ 0.41
COMMD4-213ENST00000565834 NUP210LQ5VU65 1888 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 CLDN4O14493 209 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 B4GALT2O60909 372 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 FHP07954 510 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 CDK4P11802 303 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 CCL4P13236 92 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 CPMP14384 443 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 UQCRC2P22695 453 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 MSX2P35548 267 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 CHI3L1P36222 383 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 GSK3BP49841 420 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 CDK9P50750 372 aaKnown RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 ELF3P78545 371 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 ID2Q02363 134 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 SLC13A2Q13183 592 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 ISXQ2M1V0 245 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 ASCL5Q7RTU5 278 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 NET1Q7Z628 596 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 IFNEQ86WN2 208 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 CLEC4FQ8N1N0 589 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 OR5AK3PQ8NH89 298 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 OR1F2PQ96R84 312 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 PHOX2BQ99453 314 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 KCTD14Q9BQ13 255 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 KAT8Q9H7Z6 458 aaKnown RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 SIRT3Q9NTG7 399 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 GMPR2Q9P2T1 348 aaKnown RBP17.62■□□□□ 0.41
COMMD4-213ENST00000565834 GMEB1Q9Y692 573 aa17.62■□□□□ 0.41
COMMD4-213ENST00000565834 RNF103-CHMP3A0A140T963 221 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 A8MUI8 341 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 B4E171 279 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 CSO75390 466 aaKnown RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 CDC123O75794 336 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 MT-CO3P00414 261 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 NTRK1P04629 796 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 PORP16435 677 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 TSPAN7P41732 249 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 ERV3-1Q14264 604 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 SPDYE7PQ495Y7 208 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 DHRS13Q6UX07 377 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 ANGPTL8Q6UXH0 198 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 OR10A6Q8NH74 314 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 PNPT1Q8TCS8 783 aaKnown RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 ANKRD9Q96BM1 317 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 RNF31Q96EP0 1072 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 DPH2Q9BQC3 489 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 PIF1Q9H611 641 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 DENND2DQ9H6A0 471 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-213ENST00000565834 PRTFDC1Q9NRG1 225 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 SEMA3GQ9NS98 782 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 ACSL6Q9UKU0 697 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 LOXL2Q9Y4K0 774 aa17.61■□□□□ 0.41
COMMD4-213ENST00000565834 FAM186AA6NE01 2351 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms