RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CCNG1P51959 295 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 HK2P52789 917 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 PPIAP62937 165 aaKnown RBP17.13■□□□□ 0.33
CLN6-204ENST00000564752 SERTAD2Q14140 314 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 FAM153CQ494X1 144 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 EMC4Q5J8M3 183 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 RGS9BPQ6ZS82 235 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 ZNF321PQ8N8H1 164 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 OR2M7Q8NG81 312 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 OR52B6Q8NGF0 335 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 CDK15Q96Q40 435 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 OR8D2Q9GZM6 311 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 TP63Q9H3D4 680 aaPredicted RBP17.13■□□□□ 0.33
CLN6-204ENST00000564752 PHF11Q9UIL8 331 aa17.13■□□□□ 0.33
CLN6-204ENST00000564752 C17orf105B2RV13 164 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 OR7A17O14581 309 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 TNNI3P19429 210 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 PTX3P26022 381 aaPredicted RBP17.12■□□□□ 0.33
CLN6-204ENST00000564752 GCAP28676 217 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 ARFIP1P53367 373 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 KRTAP10-9P60411 292 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 RNF4P78317 190 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 SLAMF1Q13291 335 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 ZNF750Q32MQ0 723 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 PAOXQ6QHF9 649 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 ADGRD1Q6QNK2 874 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
CLN6-204ENST00000564752 ZCCHC7Q8N3Z6 543 aaKnown RBP17.12■□□□□ 0.33
CLN6-204ENST00000564752 LRRN4CLQ8ND94 238 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 WDR20Q8TBZ3 569 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 ASB5Q8WWX0 329 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 SREK1Q8WXA9 508 aaKnown RBP17.12■□□□□ 0.33
CLN6-204ENST00000564752 ANKRD9Q96BM1 317 aaPredicted RBP17.12■□□□□ 0.33
CLN6-204ENST00000564752 NSUN5Q96P11 429 aaKnown RBP17.12■□□□□ 0.33
CLN6-204ENST00000564752 ZDHHC11Q9H8X9 412 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 MS4A12Q9NXJ0 267 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 C2CD3Q4AC94 2353 aa17.12■□□□□ 0.33
CLN6-204ENST00000564752 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 FAM166BA8MTA8 275 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 GLSO94925 669 aaPredicted RBP17.11■□□□□ 0.33
CLN6-204ENST00000564752 RPS17P08708 135 aaKnown RBP17.11■□□□□ 0.33
CLN6-204ENST00000564752 CAPN3P20807 821 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 CNR1P21554 472 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 TNFRSF17Q02223 184 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 PLGLB1Q02325 96 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 ID2Q02363 134 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 TRAF3Q13114 568 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 CUL3Q13618 768 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 TTC19Q6DKK2 380 aaPredicted RBP17.11■□□□□ 0.33
CLN6-204ENST00000564752 MEX3BQ6ZN04 569 aaKnown RBP17.11■□□□□ 0.33
CLN6-204ENST00000564752 TIFABQ6ZNK6 161 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 RTL4Q6ZR62 310 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 GPR180Q86V85 440 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 C7orf57Q8NEG2 295 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 OR5L2Q8NGL0 311 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 LILRB4Q8NHJ6 448 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 SLC2A12Q8TD20 617 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 SGCZQ96LD1 299 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 NTMT1Q9BV86 223 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 TTTY12Q9BZ98 90 aa17.11■□□□□ 0.33
CLN6-204ENST00000564752 SEMA4BQ9NPR2 832 aaPredicted RBP17.11■□□□□ 0.33
CLN6-204ENST00000564752 PSMC3IPQ9P2W1 217 aaPredicted RBP17.11■□□□□ 0.33
CLN6-204ENST00000564752 F8P00451 2351 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 A0A0G2JMM0 328 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 A0A1W2PPB8 328 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 A0A1W2PRS3 328 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 A8MT66 165 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 KIR3DP1A8MWS1 328 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 ACOT7O00154 380 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 FOXE1O00358 373 aaPredicted RBP17.1■□□□□ 0.33
CLN6-204ENST00000564752 ZNF354AO60765 605 aaPredicted RBP17.1■□□□□ 0.33
CLN6-204ENST00000564752 ETHE1O95571 254 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 COX7A2P14406 83 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 CHRNB4P30926 498 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 TLX1P31314 330 aaPredicted RBP17.1■□□□□ 0.33
CLN6-204ENST00000564752 BUD31P41223 144 aaPredicted RBP17.1■□□□□ 0.33
CLN6-204ENST00000564752 NEK2P51955 445 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 SLC29A2Q14542 456 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 GXYLT1Q4G148 440 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 TEX35Q5T0J7 233 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 NDUFAF5Q5TEU4 345 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 CYP20A1Q6UW02 462 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 SLC22A16Q86VW1 577 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 NUDT13Q86X67 352 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 RPRMLQ8N4K4 120 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 GOLM1Q8NBJ4 401 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 ZNF721Q8TF20 911 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 CHTF18Q8WVB6 975 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 RND1Q92730 232 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 SERPINI1Q99574 410 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 FAM173AQ9BQD7 235 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 TXLNGYQ9BZA5 131 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 RPF2Q9H7B2 306 aaKnown RBP17.1■□□□□ 0.33
CLN6-204ENST00000564752 ZBTB26Q9HCK0 441 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 LYARQ9NX58 379 aaKnown RBP17.1■□□□□ 0.33
CLN6-204ENST00000564752 PSD3Q9NYI0 1048 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 FETUBQ9UGM5 382 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 ITGB1BP2Q9UKP3 347 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 RNF6Q9Y252 685 aa17.1■□□□□ 0.33
CLN6-204ENST00000564752 NPIPA2E9PIF3 369 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms