RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.19■□□□□ 0.98
SPSB3-206ENST00000564709 PLEKHG7Q6ZR37 379 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 TUBA1AQ71U36 451 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 WDR53Q7Z5U6 358 aaPredicted RBP21.19■□□□□ 0.98
SPSB3-206ENST00000564709 COMTD1Q86VU5 262 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 SLC22A16Q86VW1 577 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 TEFMQ96QE5 360 aaKnown RBP21.19■□□□□ 0.98
SPSB3-206ENST00000564709 FERD3LQ96RJ6 166 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 HDAC8Q9BY41 377 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 SEMA3GQ9NS98 782 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 CLN6Q9NWW5 311 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 TMCC3Q9ULS5 477 aa21.19■□□□□ 0.98
SPSB3-206ENST00000564709 MYO10Q9HD67 2058 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 PRAMEF27A3QJZ7 478 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 GLOD5A6NK44 160 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 CNOT3O75175 753 aaKnown RBP21.18■□□□□ 0.98
SPSB3-206ENST00000564709 CCT3P49368 545 aaKnown RBP21.18■□□□□ 0.98
SPSB3-206ENST00000564709 TSTQ16762 297 aaKnown RBP21.18■□□□□ 0.98
SPSB3-206ENST00000564709 GET4Q7L5D6 327 aaPredicted RBP21.18■□□□□ 0.98
SPSB3-206ENST00000564709 WDR36Q8NI36 951 aaKnown RBP21.18■□□□□ 0.98
SPSB3-206ENST00000564709 RGMAQ96B86 450 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 C12orf66Q96MD2 445 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 PCDHGA3Q9Y5H0 932 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 ATG2BQ96BY7 2078 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 ARRDC5A6NEK1 342 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 ENTPD6O75354 484 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 ALPPL2P10696 532 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 PPP5CP53041 499 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 RPS3AP61247 264 aaKnown RBP21.18■□□□□ 0.98
SPSB3-206ENST00000564709 FGF13Q92913 245 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 SMARCD2Q92925 531 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 UCK2Q9BZX2 261 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 AICDAQ9GZX7 198 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 MMP27Q9H306 513 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 DNAJC27Q9NZQ0 273 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 REV1Q9UBZ9 1251 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 SEC14L3Q9UDX4 400 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 SERGEFQ9UGK8 458 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 ENOPH1Q9UHY7 261 aa21.18■□□□□ 0.98
SPSB3-206ENST00000564709 SNRNP200O75643 2136 aaKnown RBP21.18■□□□□ 0.98
SPSB3-206ENST00000564709 IGKV1-8A0A0C4DH67 115 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 PRR23AA6NEV1 266 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 H3BN98 237 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 TLR4O00206 839 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 TPST2O60704 377 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 CSNK1G2P78368 415 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 UBE3AQ05086 875 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 FBXO43Q4G163 708 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 DCST1Q5T197 706 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 ZBED6CLQ96FA7 236 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 CDADC1Q9BWV3 514 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 KCNK12Q9HB15 430 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 IMP3Q9NV31 184 aaKnown RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 TRPC4Q9UBN4 977 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 DSPPQ9NZW4 1301 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 M0R3H8 397 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 SCAMP1O15126 338 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 HOXB3P14651 431 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 GPC1P35052 558 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 SSR2P43308 183 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 CBX3Q13185 183 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 MLF2Q15773 248 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 ZNF367Q7RTV3 350 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 BCDIN3DQ7Z5W3 292 aaKnown RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 CADM3Q8N126 398 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 TP53I13Q8NBR0 393 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 FAM46DQ8NEK8 389 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 XAGE5Q8WWM1 108 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 INSM2Q96T92 566 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 TREX2Q9BQ50 279 aaPredicted RBP21.17■□□□□ 0.98
SPSB3-206ENST00000564709 DPH7Q9BTV6 452 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 OR51I1Q9H343 314 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 KCNK6Q9Y257 313 aa21.17■□□□□ 0.98
SPSB3-206ENST00000564709 EFCAB10A6NFE3 127 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 ZSCAN9O15535 394 aaPredicted RBP21.16■□□□□ 0.98
SPSB3-206ENST00000564709 ADAP00813 363 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 H1F0P07305 194 aaKnown RBP21.16■□□□□ 0.98
SPSB3-206ENST00000564709 FRKP42685 505 aaPredicted RBP21.16■□□□□ 0.98
SPSB3-206ENST00000564709 SLC13A2Q13183 592 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 ZNF793Q6ZN11 406 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 KBTBD8Q8NFY9 601 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 ZNF354BQ96LW1 612 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 QRFPRQ96P65 431 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 MGLLQ99685 303 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 YIPF4Q9BSR8 244 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 GLIPR2Q9H4G4 154 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 KLHL31Q9H511 634 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 PLEKHM1Q9Y4G2 1056 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 AGAP5A6NIR3 686 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 TBX1O43435 398 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 TBX19O60806 448 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 DNTTP04053 509 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 OSMP13725 252 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 KCNJ5P48544 419 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 PRKAG1P54619 331 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 PIN1Q13526 163 aaPredicted RBP21.16■□□□□ 0.98
SPSB3-206ENST00000564709 NDUFAF5Q5TEU4 345 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 AGBL4Q5VU57 503 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 FAM46CQ5VWP2 391 aa21.16■□□□□ 0.98
SPSB3-206ENST00000564709 OR4C11Q6IEV9 310 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms