RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 IGKV3-11P04433 115 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 TAC1P20366 129 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 PTGER1P34995 402 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 HERVK_113P63132 956 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 UNC50Q53HI1 259 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 C9orf40Q8IXQ3 194 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 GPALPP1Q8IXQ4 340 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 ST13P4Q8IZP2 240 aaPredicted RBP18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 POGLUT1Q8NBL1 392 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 PSD4Q8NDX1 1056 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 C7orf57Q8NEG2 295 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 MZB1Q8WU39 189 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 RBM18Q96H35 190 aaKnown RBP18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 CNPPD1Q9BV87 410 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 ERVK-6Q9BXR3 956 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 WDR41Q9HAD4 459 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 SUCOQ9UBS9 1254 aaKnown RBP18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 ZNF225Q9UK10 706 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 SLC12A4Q9UP95 1085 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 ZNF835Q9Y2P0 537 aa18.51■□□□□ 0.55
SHCBP1-203ENST00000564272 PINLYPA6NC86 204 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 G3V3Y1 287 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 PGRMC2O15173 223 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 OR10H2O60403 315 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 OR4F21O95013 312 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 PDYNP01213 254 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 KLK1P06870 262 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 DCTP40126 519 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 CASP6P55212 293 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 ERVK-8P63133 956 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 CLCQ05315 142 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 ZNF750Q32MQ0 723 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 ZNF678Q5SXM1 525 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 C10orf62Q5T681 223 aaPredicted RBP18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 OR52E8Q6IFG1 317 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 SPPL2CQ8IUH8 684 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 CHERPQ8IWX8 916 aaKnown RBP18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 GHDCQ8N2G8 530 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 OR5L2Q8NGL0 311 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 SELENOMQ8WWX9 145 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 FBXL20Q96IG2 436 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 HBEGFQ99075 208 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 FETUBQ9UGM5 382 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 TRPS1Q9UHF7 1281 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 ERVK-19Q9WJR5 959 aa18.5■□□□□ 0.55
SHCBP1-203ENST00000564272 FOXO6A8MYZ6 492 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 DYRK3O43781 588 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 HS6ST1O60243 411 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 SUPT7LO94864 414 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 SHBGP04278 402 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 PYGBP11216 843 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 HSD17B3P37058 310 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ASPHQ12797 758 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 BIKQ13323 160 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ZNF267Q14586 743 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 SPRED3Q2MJR0 410 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 TCHHL1Q5QJ38 904 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 Q6ZPB1 254 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 COMMD6Q7Z4G1 85 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 FGD2Q7Z6J4 655 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 LCA5Q86VQ0 697 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 METTL4Q8N3J2 472 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 CDYL2Q8N8U2 506 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ZFP62Q8NB50 900 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ACMSDQ8TDX5 336 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ITLN2Q8WWU7 325 aaPredicted RBP18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ART5Q96L15 291 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 PELOQ9BRX2 385 aaKnown RBP18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ADAM29Q9UKF5 820 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 SNX6Q9UNH7 406 aa18.49■□□□□ 0.55
SHCBP1-203ENST00000564272 ABOP16442 354 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 ATP5F1P24539 256 aaPredicted RBP18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 CCNYL2Q5T2Q4 361 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 NDUFAF5Q5TEU4 345 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 RTL4Q6ZR62 310 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 MYRIPQ8NFW9 859 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 OR2M7Q8NG81 312 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 NUBPLQ8TB37 319 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 UBLCP1Q8WVY7 318 aaPredicted RBP18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 RIT1Q92963 219 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 GAL3ST4Q96RP7 486 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 L2HGDHQ9H9P8 463 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 AHSPQ9NZD4 102 aa18.48■□□□□ 0.55
SHCBP1-203ENST00000564272 A0A1W2PPM1 405 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 MANBAO00462 879 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 CDC40O60508 579 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 NADKO95544 446 aaPredicted RBP18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 CLPSP04118 112 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 MAPK12P53778 367 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 GALNT1Q10472 559 aaPredicted RBP18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 MPEG1Q2M385 716 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 CMPK2Q5EBM0 449 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 PIGGQ5H8A4 983 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 OPN5Q6U736 354 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 RNF111Q6ZNA4 994 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 NCCRP1Q6ZVX7 275 aaPredicted RBP18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 PAGE2Q7Z2X7 111 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 MMP21Q8N119 569 aa18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 EIF1ADQ8N9N8 165 aaKnown RBP18.47■□□□□ 0.55
SHCBP1-203ENST00000564272 C16orf52Q8NHV5 167 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms