RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 DHCR7Q9UBM7 475 aaKnown RBP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 PCDHB3Q9Y5E6 796 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 COL27A1Q8IZC6 1860 aaPredicted RBP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 FAM227AF5H4B4 570 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 H0Y3Z8 333 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 ZNF749O43361 778 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 KRT36O76013 467 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 KRT75O95678 551 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 LMNAP02545 664 aaKnown RBP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 ATXN8OSP0DMR3 200 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 ARSFP54793 590 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 FOLH1Q04609 750 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 CEBPEQ15744 281 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 KIF26BQ2KJY2 2108 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 PRAMEF17Q5VTA0 474 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 GPR155Q7Z3F1 870 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SERPINA11Q86U17 422 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 OR4N5Q8IXE1 308 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 TMEM52Q8NDY8 209 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SUN3Q8TAQ9 357 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 TANKQ92844 425 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 ZNF681Q96N22 645 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 TRIM4Q9C037 500 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SLC7A5P2Q9GIP4 190 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 CLK4Q9HAZ1 481 aaKnown RBP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SEMA3GQ9NS98 782 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 SIRT3Q9NTG7 399 aaPredicted RBP20.67■□□□□ 0.9
LINC01960-201ENST00000563759 MAGEL2Q9UJ55 1249 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 MAU2Q9Y6X3 613 aa20.67■□□□□ 0.9
LINC01960-201ENST00000563759 EP300Q09472 2414 aaPredicted RBP20.66■□□□□ 0.9
LINC01960-201ENST00000563759 ELOVL7A1L3X0 281 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 GSTA4O15217 222 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 LRP3O75074 770 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 LDB3O75112 727 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 GMNNO75496 209 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 PSMG1O95456 288 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 NCK1P16333 377 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 ATP6V1B2P21281 511 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 CSTF2P33240 577 aaKnown RBP eCLIP20.66■□□□□ 0.9
LINC01960-201ENST00000563759 CRATP43155 626 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 XKP51811 444 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 DUSP2Q05923 314 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 TRA2AQ13595 282 aaKnown RBP eCLIP20.66■□□□□ 0.9
LINC01960-201ENST00000563759 SYT16Q17RD7 645 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 CCDC157Q569K6 752 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 YOD1Q5VVQ6 348 aaPredicted RBP20.66■□□□□ 0.9
LINC01960-201ENST00000563759 B3GNT8Q7Z7M8 397 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 PSMA8Q8TAA3 256 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 REXO5Q96IC2 774 aaKnown RBP20.66■□□□□ 0.9
LINC01960-201ENST00000563759 RSRC1Q96IZ7 334 aaKnown RBP20.66■□□□□ 0.9
LINC01960-201ENST00000563759 TMEM121BQ9BXQ6 578 aaPredicted RBP20.66■□□□□ 0.9
LINC01960-201ENST00000563759 CDC14AQ9UNH5 594 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 GMEB1Q9Y692 573 aa20.66■□□□□ 0.9
LINC01960-201ENST00000563759 C4orf47A7E2U8 309 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 FGF17O60258 216 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 PTGER1P34995 402 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 ID2Q02363 134 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 RGNQ15493 299 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 CALHM3Q86XJ0 350 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 MICU2Q8IYU8 434 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 COL26A1Q96A83 441 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 RAD21L1Q9H4I0 556 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 PARD6AQ9NPB6 346 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 RARRES3Q9UL19 164 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 SRPK3Q9UPE1 567 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 MAP4K5Q9Y4K4 846 aa20.65■□□□□ 0.9
LINC01960-201ENST00000563759 TMEM184BQ9Y519 407 aaPredicted RBP20.65■□□□□ 0.9
LINC01960-201ENST00000563759 A0A1B0GX78 115 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 DSCR3O14972 297 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 HYAL3O43820 417 aaPredicted RBP20.64■□□□□ 0.9
LINC01960-201ENST00000563759 GCGRP47871 477 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 CASP9P55211 416 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 MRPS22P82650 360 aaKnown RBP20.64■□□□□ 0.9
LINC01960-201ENST00000563759 TP53BP2Q13625 1128 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 RCN1Q15293 331 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 FXNQ16595 210 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 LCN8Q6JVE9 175 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 RNF130Q86XS8 419 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 OR52N2Q8NGI0 321 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 OR9A2Q8NGT5 310 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 OR51Q1Q8NH59 317 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 PYDC1Q8WXC3 89 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 DPH2Q9BQC3 489 aaPredicted RBP20.64■□□□□ 0.9
LINC01960-201ENST00000563759 IRF2BPLQ9H1B7 796 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 DCLRE1BQ9H816 532 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 SIDT1Q9NXL6 827 aaKnown RBP20.64■□□□□ 0.9
LINC01960-201ENST00000563759 RAPGEFL1Q9UHV5 662 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 HCN4Q9Y3Q4 1203 aa20.64■□□□□ 0.9
LINC01960-201ENST00000563759 BLACEA4D250 179 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 FKBP6O75344 327 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 CDC123O75794 336 aaPredicted RBP20.64■□□□□ 0.89
LINC01960-201ENST00000563759 CPMP14384 443 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 PPP2R1BP30154 601 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 XCR1P46094 333 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 CCT3P49368 545 aaKnown RBP20.64■□□□□ 0.89
LINC01960-201ENST00000563759 GZMMP51124 257 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 VAC14Q08AM6 782 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 SLC13A2Q13183 592 aa20.64■□□□□ 0.89
LINC01960-201ENST00000563759 TMEM107Q6UX40 140 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms