RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MRPS22P82650 360 aaKnown RBP13.46□□□□□ -0.25
COMMD4-205ENST00000562310 RBBP4Q09028 425 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 RGNQ15493 299 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 SAXO2Q658L1 398 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 GLYATQ6IB77 296 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 ANGPTL8Q6UXH0 198 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 CYP2R1Q6VVX0 501 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 ZNF551Q7Z340 670 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-205ENST00000562310 SLC30A8Q8IWU4 369 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 DTWD1Q8N5C7 304 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 OR56A1Q8NGH5 318 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 OR1L3Q8NH93 324 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 CCDC74BQ96LY2 380 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 ZNF681Q96N22 645 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 EFHD1Q9BUP0 239 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-205ENST00000562310 CHST8Q9H2A9 424 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 EPS8L2Q9H6S3 715 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 GORASP2Q9H8Y8 452 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 FGF21Q9NSA1 209 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 SIRT3Q9NTG7 399 aaPredicted RBP13.46□□□□□ -0.25
COMMD4-205ENST00000562310 THUMPD1Q9NXG2 353 aaKnown RBP13.46□□□□□ -0.25
COMMD4-205ENST00000562310 STOML1Q9UBI4 398 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 SNX8Q9Y5X2 465 aa13.46□□□□□ -0.25
COMMD4-205ENST00000562310 NUP210LQ5VU65 1888 aa13.46□□□□□ -0.26
COMMD4-205ENST00000562310 CXCR6O00574 342 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 NTN3O00634 580 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 DSCR3O14972 297 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 LRP3O75074 770 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 BMP10O95393 424 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 BMP2P12643 396 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 CPMP14384 443 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 FOLR1P15328 257 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 PSMA4P25789 261 aaKnown RBP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 PCGF2P35227 344 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 GCGRP47871 477 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 CDK9P50750 372 aaKnown RBP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 SIM1P81133 766 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 PRR5P85299 388 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 SLC34A1Q06495 639 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 VEZF1Q14119 521 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 VMACQ2NL98 169 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 GCNT6Q5T4J0 391 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 ZNF574Q6ZN55 896 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 ZNF595Q8IYB9 648 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 ZZZ3Q8IYH5 903 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 SUMF1Q8NBK3 374 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 C11orf65Q8NCR3 313 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 C7orf57Q8NEG2 295 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 OR5T3Q8NGG3 340 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 SUN3Q8TAQ9 357 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 PNPT1Q8TCS8 783 aaKnown RBP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 RHBDD1Q8TEB9 315 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 PYDC1Q8WXC3 89 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 UCN3Q969E3 161 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 NCLNQ969V3 563 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 ZNF501Q96CX3 271 aaPredicted RBP13.45□□□□□ -0.26
COMMD4-205ENST00000562310 EDEM2Q9BV94 578 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 PIF1Q9H611 641 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 TMEM38AQ9H6F2 299 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 C3orf14Q9HBI5 128 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 TMEM9BQ9NQ34 198 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 ACSL6Q9UKU0 697 aa13.45□□□□□ -0.26
COMMD4-205ENST00000562310 DHRS12A0PJE2 317 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 CLDN4O14493 209 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 EMC8O43402 210 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 KCNK5O95279 499 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 MED26O95402 600 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 GPR75O95800 540 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 NTRK1P04629 796 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 FHP07954 510 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 ANPEPP15144 967 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 NCK1P16333 377 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 PORP16435 677 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-205ENST00000562310 IL10P22301 178 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 SLC7A1P30825 629 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 FEN1P39748 380 aaKnown RBP13.44□□□□□ -0.26
COMMD4-205ENST00000562310 CRATP43155 626 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 CCT3P49368 545 aaKnown RBP13.44□□□□□ -0.26
COMMD4-205ENST00000562310 ERFP50548 548 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 XKP51811 444 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 MVDP53602 400 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 MAPK10P53779 464 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 ZNF630Q2M218 657 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-205ENST00000562310 FAM180BQ6P0A1 224 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 PRR23CQ6ZRP0 262 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 TMPRSS9Q7Z410 1059 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 BPHLQ86WA6 291 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-205ENST00000562310 RNF130Q86XS8 419 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 SPPL2CQ8IUH8 684 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 SLITRK4Q8IW52 837 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 EID3Q8N140 333 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 OR5AK3PQ8NH89 298 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 FIG4Q92562 907 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 FAM162AQ96A26 154 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 MMABQ96EY8 250 aaPredicted RBP13.44□□□□□ -0.26
COMMD4-205ENST00000562310 SLC35G5Q96KT7 338 aa13.44□□□□□ -0.26
COMMD4-205ENST00000562310 C6orf203Q9P0P8 240 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms